Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-3Q5R1E6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-3Q5R1E6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-3Q5R1E6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-3Q5R1E6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-3Q5R1E6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-3Q5R1E6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Trav6-3Q5R1E6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-3Q5R1E6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav6-3Q5R1E6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav6-3Q5R1E6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-3Q5R1E6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-3Q5R1E6 Gm12251-201ENSMUST00000117893 792 ntBASIC15.21■□□□□ 0.03
Trav6-3Q5R1E6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav6-3Q5R1E6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-3Q5R1E6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav6-3Q5R1E6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-3Q5R1E6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-3Q5R1E6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6-3Q5R1E6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trav6-3Q5R1E6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Trav6-3Q5R1E6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-3Q5R1E6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-3Q5R1E6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-3Q5R1E6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-3Q5R1E6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-3Q5R1E6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-3Q5R1E6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6-3Q5R1E6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.18■□□□□ 0.02
Trav6-3Q5R1E6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-3Q5R1E6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-3Q5R1E6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-3Q5R1E6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-3Q5R1E6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-3Q5R1E6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-3Q5R1E6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-3Q5R1E6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-3Q5R1E6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav6-3Q5R1E6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms