Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav3-3Q5R1C3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-3Q5R1C3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-3Q5R1C3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav3-3Q5R1C3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-3Q5R1C3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-3Q5R1C3 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.2□□□□□ -0.14
Trav3-3Q5R1C3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav3-3Q5R1C3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-3Q5R1C3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.2□□□□□ -0.14
Trav3-3Q5R1C3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-3Q5R1C3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-3Q5R1C3 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.2□□□□□ -0.14
Trav3-3Q5R1C3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trav3-3Q5R1C3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-3Q5R1C3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-3Q5R1C3 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav3-3Q5R1C3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-3Q5R1C3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Gm12366-201ENSMUST00000121722 873 ntBASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Gm5786-201ENSMUST00000085368 882 ntBASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-3Q5R1C3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-3Q5R1C3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-3Q5R1C3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-3Q5R1C3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-3Q5R1C3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav3-3Q5R1C3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav3-3Q5R1C3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav3-3Q5R1C3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-3Q5R1C3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-3Q5R1C3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-3Q5R1C3 Gm11175-201ENSMUST00000116172 543 ntBASIC14.16□□□□□ -0.14
Trav3-3Q5R1C3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-3Q5R1C3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav3-3Q5R1C3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-3Q5R1C3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-3Q5R1C3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms