Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trdv2-2Q5R1A4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Gm15820-201ENSMUST00000201566 728 ntBASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trdv2-2Q5R1A4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Gm7417-201ENSMUST00000192950 473 ntBASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.49□□□□□ -0.09
Trdv2-2Q5R1A4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trdv2-2Q5R1A4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trdv2-2Q5R1A4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trdv2-2Q5R1A4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trdv2-2Q5R1A4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trdv2-2Q5R1A4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trdv2-2Q5R1A4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trdv2-2Q5R1A4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trdv2-2Q5R1A4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trdv2-2Q5R1A4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.48□□□□□ -0.09
Trdv2-2Q5R1A4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trdv2-2Q5R1A4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trdv2-2Q5R1A4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trdv2-2Q5R1A4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trdv2-2Q5R1A4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trdv2-2Q5R1A4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-2Q5R1A4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-2Q5R1A4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-2Q5R1A4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-2Q5R1A4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-2Q5R1A4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-2Q5R1A4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-2Q5R1A4 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.47□□□□□ -0.09
Trdv2-2Q5R1A4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.47□□□□□ -0.09
Trdv2-2Q5R1A4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trdv2-2Q5R1A4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-2Q5R1A4 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.47□□□□□ -0.09
Trdv2-2Q5R1A4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-2Q5R1A4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trdv2-2Q5R1A4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trdv2-2Q5R1A4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trdv2-2Q5R1A4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trdv2-2Q5R1A4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.46□□□□□ -0.1
Trdv2-2Q5R1A4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.46□□□□□ -0.1
Trdv2-2Q5R1A4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trdv2-2Q5R1A4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-2Q5R1A4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-2Q5R1A4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trdv2-2Q5R1A4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-2Q5R1A4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms