Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf20Q5DTM8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf20Q5DTM8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Rnf20Q5DTM8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf20Q5DTM8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf20Q5DTM8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf20Q5DTM8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf20Q5DTM8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Rnf20Q5DTM8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Rnf20Q5DTM8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf20Q5DTM8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf20Q5DTM8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Rnf20Q5DTM8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf20Q5DTM8 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.56■■□□□ 1.2
Rnf20Q5DTM8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Rnf20Q5DTM8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf20Q5DTM8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf20Q5DTM8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf20Q5DTM8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf20Q5DTM8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf20Q5DTM8 Dapk1-207ENSMUST00000226059 5009 ntBASIC22.55■■□□□ 1.2
Rnf20Q5DTM8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.55■■□□□ 1.2
Rnf20Q5DTM8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.55■■□□□ 1.2
Rnf20Q5DTM8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.55■■□□□ 1.2
Rnf20Q5DTM8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf20Q5DTM8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Rnf20Q5DTM8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.55■■□□□ 1.2
Rnf20Q5DTM8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf20Q5DTM8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf20Q5DTM8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf20Q5DTM8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf20Q5DTM8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf20Q5DTM8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf20Q5DTM8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf20Q5DTM8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf20Q5DTM8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf20Q5DTM8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf20Q5DTM8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Rnf20Q5DTM8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf20Q5DTM8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf20Q5DTM8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf20Q5DTM8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf20Q5DTM8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf20Q5DTM8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf20Q5DTM8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Rnf20Q5DTM8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf20Q5DTM8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf20Q5DTM8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf20Q5DTM8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf20Q5DTM8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf20Q5DTM8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf20Q5DTM8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf20Q5DTM8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.52■■□□□ 1.2
Rnf20Q5DTM8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.52■■□□□ 1.2
Rnf20Q5DTM8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.52■■□□□ 1.2
Rnf20Q5DTM8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf20Q5DTM8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf20Q5DTM8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf20Q5DTM8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf20Q5DTM8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf20Q5DTM8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Rnf20Q5DTM8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf20Q5DTM8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf20Q5DTM8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf20Q5DTM8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf20Q5DTM8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Rnf20Q5DTM8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf20Q5DTM8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf20Q5DTM8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.51■■□□□ 1.19
Rnf20Q5DTM8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf20Q5DTM8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf20Q5DTM8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf20Q5DTM8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf20Q5DTM8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC22.49■■□□□ 1.19
Rnf20Q5DTM8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf20Q5DTM8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf20Q5DTM8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.49■■□□□ 1.19
Rnf20Q5DTM8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf20Q5DTM8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Rnf20Q5DTM8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf20Q5DTM8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms