Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rc3h1Q4VGL6 Gm6211-202ENSMUST00000167849 925 ntBASIC22■■□□□ 1.11
Rc3h1Q4VGL6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC22■■□□□ 1.11
Rc3h1Q4VGL6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Rc3h1Q4VGL6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Rc3h1Q4VGL6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Rc3h1Q4VGL6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Rc3h1Q4VGL6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Gm12441-201ENSMUST00000121806 588 ntBASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Golph3-202ENSMUST00000226517 2359 ntBASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rc3h1Q4VGL6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rc3h1Q4VGL6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.98■■□□□ 1.11
Rc3h1Q4VGL6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.98■■□□□ 1.11
Rc3h1Q4VGL6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rc3h1Q4VGL6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rc3h1Q4VGL6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rc3h1Q4VGL6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rc3h1Q4VGL6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rc3h1Q4VGL6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rc3h1Q4VGL6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rc3h1Q4VGL6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rc3h1Q4VGL6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rc3h1Q4VGL6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Rc3h1Q4VGL6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Rc3h1Q4VGL6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rc3h1Q4VGL6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rc3h1Q4VGL6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rc3h1Q4VGL6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
Rc3h1Q4VGL6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.97■■□□□ 1.11
Rc3h1Q4VGL6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Rc3h1Q4VGL6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Rc3h1Q4VGL6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.97■■□□□ 1.11
Rc3h1Q4VGL6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rc3h1Q4VGL6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rc3h1Q4VGL6 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.96■■□□□ 1.11
Rc3h1Q4VGL6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.96■■□□□ 1.11
Rc3h1Q4VGL6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
Rc3h1Q4VGL6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rc3h1Q4VGL6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rc3h1Q4VGL6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rc3h1Q4VGL6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rc3h1Q4VGL6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Rc3h1Q4VGL6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rc3h1Q4VGL6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rc3h1Q4VGL6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
Rc3h1Q4VGL6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rc3h1Q4VGL6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rc3h1Q4VGL6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rc3h1Q4VGL6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rc3h1Q4VGL6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Rc3h1Q4VGL6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rc3h1Q4VGL6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
Rc3h1Q4VGL6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rc3h1Q4VGL6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Rc3h1Q4VGL6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Rc3h1Q4VGL6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rc3h1Q4VGL6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Rc3h1Q4VGL6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rc3h1Q4VGL6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rc3h1Q4VGL6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rc3h1Q4VGL6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Rc3h1Q4VGL6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
Rc3h1Q4VGL6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rc3h1Q4VGL6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rc3h1Q4VGL6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.93■■□□□ 1.1
Rc3h1Q4VGL6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rc3h1Q4VGL6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rc3h1Q4VGL6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rc3h1Q4VGL6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms