Protein–RNA interactions for Protein: Q3V0K9

Pls1, Plastin-1, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pls1Q3V0K9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pls1Q3V0K9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pls1Q3V0K9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Pls1Q3V0K9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pls1Q3V0K9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Pls1Q3V0K9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.82■■□□□ 1.08
Pls1Q3V0K9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.82■■□□□ 1.08
Pls1Q3V0K9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pls1Q3V0K9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.82■■□□□ 1.08
Pls1Q3V0K9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pls1Q3V0K9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pls1Q3V0K9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pls1Q3V0K9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pls1Q3V0K9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Pls1Q3V0K9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pls1Q3V0K9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pls1Q3V0K9 Gm12527-201ENSMUST00000117967 564 ntBASIC21.81■■□□□ 1.08
Pls1Q3V0K9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pls1Q3V0K9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pls1Q3V0K9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pls1Q3V0K9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
Pls1Q3V0K9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pls1Q3V0K9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pls1Q3V0K9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pls1Q3V0K9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pls1Q3V0K9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
Pls1Q3V0K9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pls1Q3V0K9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pls1Q3V0K9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pls1Q3V0K9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pls1Q3V0K9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pls1Q3V0K9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pls1Q3V0K9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pls1Q3V0K9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.79■■□□□ 1.08
Pls1Q3V0K9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.79■■□□□ 1.08
Pls1Q3V0K9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pls1Q3V0K9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pls1Q3V0K9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pls1Q3V0K9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.79■■□□□ 1.08
Pls1Q3V0K9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pls1Q3V0K9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.79■■□□□ 1.08
Pls1Q3V0K9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pls1Q3V0K9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pls1Q3V0K9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Pls1Q3V0K9 Gm20760-201ENSMUST00000179197 648 ntBASIC21.78■■□□□ 1.08
Pls1Q3V0K9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.78■■□□□ 1.08
Pls1Q3V0K9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.78■■□□□ 1.08
Pls1Q3V0K9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pls1Q3V0K9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pls1Q3V0K9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pls1Q3V0K9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Pls1Q3V0K9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Pls1Q3V0K9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
Pls1Q3V0K9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pls1Q3V0K9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pls1Q3V0K9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pls1Q3V0K9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pls1Q3V0K9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Pls1Q3V0K9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pls1Q3V0K9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pls1Q3V0K9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pls1Q3V0K9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Pls1Q3V0K9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pls1Q3V0K9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pls1Q3V0K9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Pls1Q3V0K9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pls1Q3V0K9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pls1Q3V0K9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pls1Q3V0K9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pls1Q3V0K9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pls1Q3V0K9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pls1Q3V0K9 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.76■■□□□ 1.07
Pls1Q3V0K9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pls1Q3V0K9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Pls1Q3V0K9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pls1Q3V0K9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pls1Q3V0K9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pls1Q3V0K9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pls1Q3V0K9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pls1Q3V0K9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pls1Q3V0K9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Pls1Q3V0K9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Pls1Q3V0K9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pls1Q3V0K9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pls1Q3V0K9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Pls1Q3V0K9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pls1Q3V0K9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pls1Q3V0K9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pls1Q3V0K9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Pls1Q3V0K9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.75■■□□□ 1.07
Pls1Q3V0K9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Pls1Q3V0K9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pls1Q3V0K9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pls1Q3V0K9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pls1Q3V0K9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Pls1Q3V0K9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pls1Q3V0K9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Pls1Q3V0K9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.74■■□□□ 1.07
Pls1Q3V0K9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pls1Q3V0K9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms