Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa3Q3UPR0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa3Q3UPR0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Gm43530-201ENSMUST00000195920 274 ntBASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa3Q3UPR0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.35■□□□□ 0.21
Shisa3Q3UPR0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa3Q3UPR0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.34■□□□□ 0.21
Shisa3Q3UPR0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa3Q3UPR0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa3Q3UPR0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa3Q3UPR0 Gm21956-201ENSMUST00000179946 522 ntBASIC16.34■□□□□ 0.21
Shisa3Q3UPR0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Shisa3Q3UPR0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa3Q3UPR0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa3Q3UPR0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Shisa3Q3UPR0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shisa3Q3UPR0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Shisa3Q3UPR0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shisa3Q3UPR0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa3Q3UPR0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa3Q3UPR0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa3Q3UPR0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa3Q3UPR0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.33■□□□□ 0.2
Shisa3Q3UPR0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa3Q3UPR0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa3Q3UPR0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa3Q3UPR0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa3Q3UPR0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Shisa3Q3UPR0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.32■□□□□ 0.2
Shisa3Q3UPR0 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.32■□□□□ 0.2
Shisa3Q3UPR0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Shisa3Q3UPR0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa3Q3UPR0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa3Q3UPR0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa3Q3UPR0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa3Q3UPR0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa3Q3UPR0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa3Q3UPR0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Shisa3Q3UPR0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Shisa3Q3UPR0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa3Q3UPR0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa3Q3UPR0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa3Q3UPR0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa3Q3UPR0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa3Q3UPR0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa3Q3UPR0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa3Q3UPR0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa3Q3UPR0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms