Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln6Q3U466 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln6Q3U466 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln6Q3U466 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln6Q3U466 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln6Q3U466 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln6Q3U466 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln6Q3U466 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.11■□□□□ 0.17
Cln6Q3U466 Golph3-205ENSMUST00000228671 2842 ntBASIC16.11■□□□□ 0.17
Cln6Q3U466 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cln6Q3U466 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln6Q3U466 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln6Q3U466 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln6Q3U466 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln6Q3U466 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cln6Q3U466 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln6Q3U466 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln6Q3U466 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cln6Q3U466 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cln6Q3U466 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.11■□□□□ 0.17
Cln6Q3U466 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.1■□□□□ 0.17
Cln6Q3U466 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cln6Q3U466 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cln6Q3U466 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cln6Q3U466 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cln6Q3U466 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cln6Q3U466 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cln6Q3U466 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.1■□□□□ 0.17
Cln6Q3U466 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.1■□□□□ 0.17
Cln6Q3U466 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cln6Q3U466 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cln6Q3U466 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cln6Q3U466 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cln6Q3U466 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cln6Q3U466 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cln6Q3U466 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cln6Q3U466 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cln6Q3U466 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cln6Q3U466 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cln6Q3U466 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cln6Q3U466 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cln6Q3U466 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cln6Q3U466 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cln6Q3U466 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cln6Q3U466 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cln6Q3U466 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cln6Q3U466 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
Cln6Q3U466 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cln6Q3U466 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cln6Q3U466 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Cln6Q3U466 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cln6Q3U466 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cln6Q3U466 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cln6Q3U466 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cln6Q3U466 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cln6Q3U466 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cln6Q3U466 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cln6Q3U466 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.08■□□□□ 0.16
Cln6Q3U466 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cln6Q3U466 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cln6Q3U466 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.08■□□□□ 0.16
Cln6Q3U466 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.08■□□□□ 0.16
Cln6Q3U466 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Cln6Q3U466 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cln6Q3U466 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cln6Q3U466 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cln6Q3U466 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cln6Q3U466 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Cln6Q3U466 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cln6Q3U466 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Cln6Q3U466 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cln6Q3U466 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cln6Q3U466 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
Cln6Q3U466 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cln6Q3U466 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cln6Q3U466 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cln6Q3U466 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cln6Q3U466 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cln6Q3U466 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cln6Q3U466 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cln6Q3U466 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cln6Q3U466 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cln6Q3U466 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cln6Q3U466 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cln6Q3U466 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cln6Q3U466 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cln6Q3U466 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cln6Q3U466 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cln6Q3U466 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cln6Q3U466 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cln6Q3U466 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.06■□□□□ 0.16
Cln6Q3U466 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cln6Q3U466 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cln6Q3U466 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cln6Q3U466 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cln6Q3U466 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cln6Q3U466 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cln6Q3U466 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cln6Q3U466 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cln6Q3U466 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms