Protein–RNA interactions for Protein: Q3SXB8

Colec11, Collectin-11, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colec11Q3SXB8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Colec11Q3SXB8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Colec11Q3SXB8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Colec11Q3SXB8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Colec11Q3SXB8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Colec11Q3SXB8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Colec11Q3SXB8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Colec11Q3SXB8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Colec11Q3SXB8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Colec11Q3SXB8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Colec11Q3SXB8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Colec11Q3SXB8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Colec11Q3SXB8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Colec11Q3SXB8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Colec11Q3SXB8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Colec11Q3SXB8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Colec11Q3SXB8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.21■□□□□ 0.67
Colec11Q3SXB8 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.21■□□□□ 0.67
Colec11Q3SXB8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Colec11Q3SXB8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Colec11Q3SXB8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Colec11Q3SXB8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.21■□□□□ 0.67
Colec11Q3SXB8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Colec11Q3SXB8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.2■□□□□ 0.66
Colec11Q3SXB8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.2■□□□□ 0.66
Colec11Q3SXB8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Colec11Q3SXB8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Colec11Q3SXB8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Colec11Q3SXB8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Colec11Q3SXB8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Gm38205-201ENSMUST00000192243 258 ntBASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Colec11Q3SXB8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Colec11Q3SXB8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Colec11Q3SXB8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Colec11Q3SXB8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.18■□□□□ 0.66
Colec11Q3SXB8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Colec11Q3SXB8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Colec11Q3SXB8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Colec11Q3SXB8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Colec11Q3SXB8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Colec11Q3SXB8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Colec11Q3SXB8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Colec11Q3SXB8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Colec11Q3SXB8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Colec11Q3SXB8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Colec11Q3SXB8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Colec11Q3SXB8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Colec11Q3SXB8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.17■□□□□ 0.66
Colec11Q3SXB8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Colec11Q3SXB8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Colec11Q3SXB8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Colec11Q3SXB8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.16■□□□□ 0.66
Colec11Q3SXB8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Colec11Q3SXB8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Colec11Q3SXB8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Colec11Q3SXB8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Colec11Q3SXB8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Colec11Q3SXB8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Colec11Q3SXB8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.15■□□□□ 0.66
Colec11Q3SXB8 Gm7514-201ENSMUST00000209475 934 ntBASIC19.15■□□□□ 0.66
Colec11Q3SXB8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Colec11Q3SXB8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.15■□□□□ 0.66
Colec11Q3SXB8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.15■□□□□ 0.66
Colec11Q3SXB8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Colec11Q3SXB8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Colec11Q3SXB8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Colec11Q3SXB8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Colec11Q3SXB8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.15■□□□□ 0.66
Colec11Q3SXB8 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.14■□□□□ 0.65
Colec11Q3SXB8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms