Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.45■□□□□ 0.86
Col19a1Q0VF58 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Col19a1Q0VF58 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col19a1Q0VF58 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col19a1Q0VF58 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col19a1Q0VF58 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.45■□□□□ 0.86
Col19a1Q0VF58 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col19a1Q0VF58 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col19a1Q0VF58 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col19a1Q0VF58 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col19a1Q0VF58 Gm13559-201ENSMUST00000120476 863 ntBASIC20.44■□□□□ 0.86
Col19a1Q0VF58 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.44■□□□□ 0.86
Col19a1Q0VF58 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.44■□□□□ 0.86
Col19a1Q0VF58 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Col19a1Q0VF58 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col19a1Q0VF58 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col19a1Q0VF58 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col19a1Q0VF58 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col19a1Q0VF58 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col19a1Q0VF58 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col19a1Q0VF58 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col19a1Q0VF58 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col19a1Q0VF58 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col19a1Q0VF58 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col19a1Q0VF58 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.43■□□□□ 0.86
Col19a1Q0VF58 Gm11539-201ENSMUST00000119837 557 ntBASIC20.43■□□□□ 0.86
Col19a1Q0VF58 Gm13436-201ENSMUST00000120418 567 ntBASIC20.43■□□□□ 0.86
Col19a1Q0VF58 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col19a1Q0VF58 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.43■□□□□ 0.86
Col19a1Q0VF58 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.43■□□□□ 0.86
Col19a1Q0VF58 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col19a1Q0VF58 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col19a1Q0VF58 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col19a1Q0VF58 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col19a1Q0VF58 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col19a1Q0VF58 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.42■□□□□ 0.86
Col19a1Q0VF58 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col19a1Q0VF58 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col19a1Q0VF58 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Col19a1Q0VF58 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.42■□□□□ 0.86
Col19a1Q0VF58 Gm7889-201ENSMUST00000185591 958 ntBASIC20.42■□□□□ 0.86
Col19a1Q0VF58 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col19a1Q0VF58 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col19a1Q0VF58 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col19a1Q0VF58 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col19a1Q0VF58 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col19a1Q0VF58 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col19a1Q0VF58 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col19a1Q0VF58 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col19a1Q0VF58 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.41■□□□□ 0.86
Col19a1Q0VF58 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Col19a1Q0VF58 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col19a1Q0VF58 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col19a1Q0VF58 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col19a1Q0VF58 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col19a1Q0VF58 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col19a1Q0VF58 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col19a1Q0VF58 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col19a1Q0VF58 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Col19a1Q0VF58 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col19a1Q0VF58 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.4■□□□□ 0.86
Col19a1Q0VF58 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col19a1Q0VF58 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col19a1Q0VF58 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col19a1Q0VF58 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col19a1Q0VF58 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col19a1Q0VF58 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col19a1Q0VF58 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Col19a1Q0VF58 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.39■□□□□ 0.85
Col19a1Q0VF58 Gm21814-202ENSMUST00000203277 873 ntBASIC20.39■□□□□ 0.85
Col19a1Q0VF58 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.39■□□□□ 0.85
Col19a1Q0VF58 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.39■□□□□ 0.85
Col19a1Q0VF58 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.39■□□□□ 0.85
Col19a1Q0VF58 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col19a1Q0VF58 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col19a1Q0VF58 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col19a1Q0VF58 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col19a1Q0VF58 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Col19a1Q0VF58 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col19a1Q0VF58 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col19a1Q0VF58 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col19a1Q0VF58 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col19a1Q0VF58 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col19a1Q0VF58 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.38■□□□□ 0.85
Col19a1Q0VF58 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.38■□□□□ 0.85
Col19a1Q0VF58 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col19a1Q0VF58 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col19a1Q0VF58 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col19a1Q0VF58 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Col19a1Q0VF58 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col19a1Q0VF58 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Col19a1Q0VF58 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col19a1Q0VF58 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Col19a1Q0VF58 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col19a1Q0VF58 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.37■□□□□ 0.85
Col19a1Q0VF58 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.36■□□□□ 0.85
Col19a1Q0VF58 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col19a1Q0VF58 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col19a1Q0VF58 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col19a1Q0VF58 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms