Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tff1Q08423 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tff1Q08423 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tff1Q08423 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tff1Q08423 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tff1Q08423 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.69■□□□□ 0.1
Tff1Q08423 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tff1Q08423 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.68■□□□□ 0.1
Tff1Q08423 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tff1Q08423 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Tff1Q08423 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tff1Q08423 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tff1Q08423 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.68■□□□□ 0.1
Tff1Q08423 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tff1Q08423 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tff1Q08423 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.68■□□□□ 0.1
Tff1Q08423 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.68■□□□□ 0.1
Tff1Q08423 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.68■□□□□ 0.1
Tff1Q08423 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tff1Q08423 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tff1Q08423 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tff1Q08423 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tff1Q08423 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tff1Q08423 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tff1Q08423 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tff1Q08423 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tff1Q08423 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Tff1Q08423 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tff1Q08423 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tff1Q08423 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tff1Q08423 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.67■□□□□ 0.1
Tff1Q08423 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tff1Q08423 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tff1Q08423 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tff1Q08423 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tff1Q08423 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.67■□□□□ 0.1
Tff1Q08423 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.67■□□□□ 0.1
Tff1Q08423 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tff1Q08423 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tff1Q08423 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tff1Q08423 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tff1Q08423 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tff1Q08423 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tff1Q08423 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tff1Q08423 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tff1Q08423 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tff1Q08423 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tff1Q08423 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tff1Q08423 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tff1Q08423 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tff1Q08423 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tff1Q08423 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.66■□□□□ 0.1
Tff1Q08423 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tff1Q08423 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.66■□□□□ 0.1
Tff1Q08423 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tff1Q08423 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.66■□□□□ 0.1
Tff1Q08423 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tff1Q08423 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.66■□□□□ 0.1
Tff1Q08423 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Tff1Q08423 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tff1Q08423 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tff1Q08423 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tff1Q08423 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Tff1Q08423 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.65■□□□□ 0.1
Tff1Q08423 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.65■□□□□ 0.1
Tff1Q08423 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.65■□□□□ 0.1
Tff1Q08423 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.65■□□□□ 0.1
Tff1Q08423 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tff1Q08423 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.65■□□□□ 0.1
Tff1Q08423 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.65■□□□□ 0.1
Tff1Q08423 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tff1Q08423 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tff1Q08423 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tff1Q08423 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tff1Q08423 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tff1Q08423 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tff1Q08423 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tff1Q08423 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tff1Q08423 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tff1Q08423 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tff1Q08423 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.64■□□□□ 0.09
Tff1Q08423 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tff1Q08423 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tff1Q08423 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tff1Q08423 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms