Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.25■□□□□ 0.19
Smn1P97801 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.25■□□□□ 0.19
Smn1P97801 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Smn1P97801 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smn1P97801 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
Smn1P97801 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Smn1P97801 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smn1P97801 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Smn1P97801 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smn1P97801 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Smn1P97801 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smn1P97801 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.24■□□□□ 0.19
Smn1P97801 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smn1P97801 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smn1P97801 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smn1P97801 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smn1P97801 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smn1P97801 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smn1P97801 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Smn1P97801 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smn1P97801 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smn1P97801 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smn1P97801 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smn1P97801 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smn1P97801 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smn1P97801 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smn1P97801 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smn1P97801 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smn1P97801 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smn1P97801 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smn1P97801 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smn1P97801 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smn1P97801 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smn1P97801 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.22■□□□□ 0.19
Smn1P97801 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smn1P97801 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.22■□□□□ 0.19
Smn1P97801 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smn1P97801 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smn1P97801 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smn1P97801 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smn1P97801 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smn1P97801 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.22■□□□□ 0.19
Smn1P97801 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.22■□□□□ 0.19
Smn1P97801 Grk6-206ENSMUST00000224995 2971 ntBASIC16.22■□□□□ 0.19
Smn1P97801 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smn1P97801 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.22■□□□□ 0.19
Smn1P97801 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smn1P97801 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smn1P97801 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.22■□□□□ 0.19
Smn1P97801 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Smn1P97801 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smn1P97801 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
Smn1P97801 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smn1P97801 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.21■□□□□ 0.19
Smn1P97801 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Smn1P97801 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smn1P97801 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smn1P97801 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smn1P97801 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smn1P97801 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smn1P97801 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Smn1P97801 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smn1P97801 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smn1P97801 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smn1P97801 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.21■□□□□ 0.19
Smn1P97801 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Smn1P97801 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smn1P97801 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smn1P97801 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smn1P97801 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smn1P97801 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smn1P97801 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smn1P97801 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smn1P97801 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.2■□□□□ 0.18
Smn1P97801 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smn1P97801 Gm22238-201ENSMUST00000175222 88 ntBASIC16.2■□□□□ 0.18
Smn1P97801 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.2■□□□□ 0.18
Smn1P97801 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smn1P97801 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smn1P97801 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smn1P97801 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smn1P97801 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smn1P97801 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smn1P97801 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smn1P97801 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smn1P97801 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.2■□□□□ 0.18
Smn1P97801 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Smn1P97801 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smn1P97801 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Smn1P97801 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smn1P97801 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smn1P97801 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smn1P97801 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.19■□□□□ 0.18
Smn1P97801 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smn1P97801 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smn1P97801 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smn1P97801 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smn1P97801 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smn1P97801 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smn1P97801 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms