Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
Cxcr4P70658 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cxcr4P70658 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Cxcr4P70658 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cxcr4P70658 Gm26833-201ENSMUST00000180899 440 ntBASIC17.77■□□□□ 0.44
Cxcr4P70658 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cxcr4P70658 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.77■□□□□ 0.43
Cxcr4P70658 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cxcr4P70658 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Cxcr4P70658 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cxcr4P70658 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cxcr4P70658 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr4P70658 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.76■□□□□ 0.43
Cxcr4P70658 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.76■□□□□ 0.43
Cxcr4P70658 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr4P70658 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr4P70658 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr4P70658 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.76■□□□□ 0.43
Cxcr4P70658 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
Cxcr4P70658 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr4P70658 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr4P70658 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr4P70658 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr4P70658 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr4P70658 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.76■□□□□ 0.43
Cxcr4P70658 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Cxcr4P70658 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cxcr4P70658 BC021767-201ENSMUST00000126387 1716 ntBASIC17.75■□□□□ 0.43
Cxcr4P70658 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr4P70658 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr4P70658 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr4P70658 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Cxcr4P70658 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Cxcr4P70658 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.75■□□□□ 0.43
Cxcr4P70658 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr4P70658 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.75■□□□□ 0.43
Cxcr4P70658 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cxcr4P70658 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.75■□□□□ 0.43
Cxcr4P70658 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr4P70658 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr4P70658 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr4P70658 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cxcr4P70658 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.74■□□□□ 0.43
Cxcr4P70658 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr4P70658 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.74■□□□□ 0.43
Cxcr4P70658 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr4P70658 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr4P70658 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr4P70658 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr4P70658 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr4P70658 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr4P70658 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr4P70658 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr4P70658 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr4P70658 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr4P70658 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr4P70658 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr4P70658 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr4P70658 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cxcr4P70658 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr4P70658 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.73■□□□□ 0.43
Cxcr4P70658 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr4P70658 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cxcr4P70658 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr4P70658 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr4P70658 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cxcr4P70658 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr4P70658 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr4P70658 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr4P70658 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr4P70658 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr4P70658 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr4P70658 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr4P70658 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr4P70658 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr4P70658 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr4P70658 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr4P70658 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr4P70658 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.72■□□□□ 0.43
Cxcr4P70658 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr4P70658 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr4P70658 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr4P70658 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cxcr4P70658 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr4P70658 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr4P70658 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcr4P70658 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcr4P70658 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcr4P70658 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcr4P70658 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcr4P70658 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcr4P70658 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcr4P70658 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcr4P70658 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcr4P70658 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cxcr4P70658 Smad6-203ENSMUST00000179458 273 ntBASIC17.71■□□□□ 0.43
Cxcr4P70658 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.71■□□□□ 0.43
Cxcr4P70658 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.71■□□□□ 0.43
Cxcr4P70658 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cxcr4P70658 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms