Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Six5P70178 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.72■□□□□ 0.43
Six5P70178 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six5P70178 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six5P70178 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six5P70178 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six5P70178 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six5P70178 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six5P70178 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six5P70178 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six5P70178 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six5P70178 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six5P70178 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six5P70178 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.71■□□□□ 0.43
Six5P70178 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six5P70178 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.71■□□□□ 0.43
Six5P70178 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six5P70178 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six5P70178 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Six5P70178 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Six5P70178 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.42
Six5P70178 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six5P70178 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six5P70178 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six5P70178 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.7■□□□□ 0.42
Six5P70178 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.7■□□□□ 0.42
Six5P70178 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Six5P70178 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six5P70178 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six5P70178 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.7■□□□□ 0.42
Six5P70178 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six5P70178 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six5P70178 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Six5P70178 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Six5P70178 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Six5P70178 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six5P70178 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Six5P70178 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Six5P70178 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Six5P70178 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six5P70178 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six5P70178 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six5P70178 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Six5P70178 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six5P70178 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Six5P70178 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six5P70178 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Six5P70178 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six5P70178 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six5P70178 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six5P70178 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six5P70178 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Six5P70178 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six5P70178 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Six5P70178 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six5P70178 Gm38205-201ENSMUST00000192243 258 ntBASIC17.68■□□□□ 0.42
Six5P70178 Gm9988-201ENSMUST00000069786 435 ntBASIC17.68■□□□□ 0.42
Six5P70178 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six5P70178 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six5P70178 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Six5P70178 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Six5P70178 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six5P70178 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six5P70178 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six5P70178 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Six5P70178 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Six5P70178 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six5P70178 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six5P70178 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six5P70178 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six5P70178 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Six5P70178 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six5P70178 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six5P70178 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six5P70178 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Six5P70178 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Six5P70178 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six5P70178 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Six5P70178 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six5P70178 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six5P70178 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Six5P70178 Gm13146-201ENSMUST00000118508 780 ntBASIC17.66■□□□□ 0.42
Six5P70178 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.66■□□□□ 0.42
Six5P70178 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.66■□□□□ 0.42
Six5P70178 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.66■□□□□ 0.42
Six5P70178 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.66■□□□□ 0.42
Six5P70178 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.66■□□□□ 0.42
Six5P70178 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six5P70178 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.66■□□□□ 0.42
Six5P70178 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Six5P70178 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six5P70178 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.66■□□□□ 0.42
Six5P70178 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six5P70178 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six5P70178 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six5P70178 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Six5P70178 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.66■□□□□ 0.42
Six5P70178 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six5P70178 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six5P70178 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms