Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgb1P63158 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgb1P63158 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgb1P63158 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgb1P63158 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgb1P63158 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgb1P63158 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Hmgb1P63158 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgb1P63158 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Hmgb1P63158 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Hmgb1P63158 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgb1P63158 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgb1P63158 Gm11421-201ENSMUST00000122124 294 ntBASIC20.83■□□□□ 0.93
Hmgb1P63158 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgb1P63158 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.83■□□□□ 0.93
Hmgb1P63158 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgb1P63158 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.92
Hmgb1P63158 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgb1P63158 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgb1P63158 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.83■□□□□ 0.92
Hmgb1P63158 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgb1P63158 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgb1P63158 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgb1P63158 Gm12821-201ENSMUST00000120022 600 ntBASIC20.82■□□□□ 0.92
Hmgb1P63158 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgb1P63158 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Hmgb1P63158 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgb1P63158 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgb1P63158 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgb1P63158 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgb1P63158 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Hmgb1P63158 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgb1P63158 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgb1P63158 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgb1P63158 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb1P63158 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb1P63158 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb1P63158 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb1P63158 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Hmgb1P63158 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb1P63158 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.8■□□□□ 0.92
Hmgb1P63158 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb1P63158 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Hmgb1P63158 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb1P63158 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb1P63158 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.8■□□□□ 0.92
Hmgb1P63158 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Hmgb1P63158 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.8■□□□□ 0.92
Hmgb1P63158 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgb1P63158 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgb1P63158 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgb1P63158 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgb1P63158 Gm8493-201ENSMUST00000196881 489 ntBASIC20.79■□□□□ 0.92
Hmgb1P63158 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Hmgb1P63158 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.79■□□□□ 0.92
Hmgb1P63158 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgb1P63158 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Hmgb1P63158 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Hmgb1P63158 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Hmgb1P63158 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgb1P63158 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgb1P63158 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Hmgb1P63158 Gm43173-201ENSMUST00000202246 593 ntBASIC20.78■□□□□ 0.92
Hmgb1P63158 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgb1P63158 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgb1P63158 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgb1P63158 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.77■□□□□ 0.92
Hmgb1P63158 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Hmgb1P63158 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Hmgb1P63158 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Hmgb1P63158 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgb1P63158 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Hmgb1P63158 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hmgb1P63158 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hmgb1P63158 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hmgb1P63158 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Hmgb1P63158 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.77■□□□□ 0.91
Hmgb1P63158 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hmgb1P63158 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb1P63158 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb1P63158 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Hmgb1P63158 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Hmgb1P63158 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb1P63158 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb1P63158 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.76■□□□□ 0.91
Hmgb1P63158 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb1P63158 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Hmgb1P63158 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb1P63158 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb1P63158 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb1P63158 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb1P63158 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.75■□□□□ 0.91
Hmgb1P63158 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hmgb1P63158 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Hmgb1P63158 Gm27801-201ENSMUST00000184174 223 ntBASIC20.75■□□□□ 0.91
Hmgb1P63158 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hmgb1P63158 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgb1P63158 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgb1P63158 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgb1P63158 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms