Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ybx1P62960 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.53■□□□□ 0.72
Ybx1P62960 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ybx1P62960 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ybx1P62960 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ybx1P62960 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ybx1P62960 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ybx1P62960 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.52■□□□□ 0.72
Ybx1P62960 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ybx1P62960 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ybx1P62960 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ybx1P62960 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ybx1P62960 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ybx1P62960 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
Ybx1P62960 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Ybx1P62960 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ybx1P62960 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
Ybx1P62960 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ybx1P62960 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.52■□□□□ 0.71
Ybx1P62960 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.51■□□□□ 0.71
Ybx1P62960 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ybx1P62960 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ybx1P62960 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ybx1P62960 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.51■□□□□ 0.71
Ybx1P62960 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.51■□□□□ 0.71
Ybx1P62960 Rab3c-203ENSMUST00000224180 967 ntBASIC19.51■□□□□ 0.71
Ybx1P62960 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ybx1P62960 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ybx1P62960 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Ybx1P62960 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ybx1P62960 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ybx1P62960 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ybx1P62960 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ybx1P62960 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ybx1P62960 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ybx1P62960 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ybx1P62960 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ybx1P62960 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ybx1P62960 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ybx1P62960 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Ybx1P62960 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.5■□□□□ 0.71
Ybx1P62960 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ybx1P62960 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ybx1P62960 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ybx1P62960 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ybx1P62960 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ybx1P62960 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ybx1P62960 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.49■□□□□ 0.71
Ybx1P62960 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ybx1P62960 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ybx1P62960 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ybx1P62960 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ybx1P62960 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ybx1P62960 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ybx1P62960 Gm27275-201ENSMUST00000184318 272 ntBASIC19.48■□□□□ 0.71
Ybx1P62960 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ybx1P62960 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ybx1P62960 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ybx1P62960 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ybx1P62960 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ybx1P62960 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ybx1P62960 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ybx1P62960 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ybx1P62960 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ybx1P62960 Gm10812-201ENSMUST00000099864 546 ntBASIC19.47■□□□□ 0.71
Ybx1P62960 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ybx1P62960 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ybx1P62960 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ybx1P62960 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx1P62960 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx1P62960 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx1P62960 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx1P62960 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx1P62960 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx1P62960 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.46■□□□□ 0.71
Ybx1P62960 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx1P62960 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx1P62960 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.46■□□□□ 0.71
Ybx1P62960 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx1P62960 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.45■□□□□ 0.7
Ybx1P62960 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx1P62960 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx1P62960 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx1P62960 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx1P62960 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ybx1P62960 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx1P62960 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.45■□□□□ 0.7
Ybx1P62960 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx1P62960 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx1P62960 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.45■□□□□ 0.7
Ybx1P62960 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx1P62960 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ybx1P62960 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ybx1P62960 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx1P62960 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx1P62960 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ybx1P62960 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.44■□□□□ 0.7
Ybx1P62960 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Ybx1P62960 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx1P62960 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms