Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.6■□□□□ 0.25
Lsm6P62313 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Lsm6P62313 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm6P62313 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm6P62313 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.6■□□□□ 0.25
Lsm6P62313 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Lsm6P62313 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm6P62313 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm6P62313 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm6P62313 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm6P62313 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm6P62313 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm6P62313 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm6P62313 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Lsm6P62313 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Lsm6P62313 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.59■□□□□ 0.25
Lsm6P62313 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.59■□□□□ 0.25
Lsm6P62313 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 BC021767-201ENSMUST00000126387 1716 ntBASIC16.59■□□□□ 0.25
Lsm6P62313 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.59■□□□□ 0.25
Lsm6P62313 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Lsm6P62313 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm6P62313 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Lsm6P62313 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lsm6P62313 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lsm6P62313 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lsm6P62313 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm6P62313 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.58■□□□□ 0.24
Lsm6P62313 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm6P62313 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.58■□□□□ 0.24
Lsm6P62313 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm6P62313 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm6P62313 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Lsm6P62313 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm6P62313 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm6P62313 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm6P62313 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm6P62313 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm6P62313 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.57■□□□□ 0.24
Lsm6P62313 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm6P62313 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm6P62313 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Lsm6P62313 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm6P62313 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.57■□□□□ 0.24
Lsm6P62313 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm6P62313 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.57■□□□□ 0.24
Lsm6P62313 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm6P62313 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.57■□□□□ 0.24
Lsm6P62313 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.57■□□□□ 0.24
Lsm6P62313 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm6P62313 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm6P62313 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm6P62313 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm6P62313 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Lsm6P62313 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm6P62313 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm6P62313 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm6P62313 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm6P62313 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm6P62313 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm6P62313 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Lsm6P62313 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.56■□□□□ 0.24
Lsm6P62313 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.56■□□□□ 0.24
Lsm6P62313 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm6P62313 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm6P62313 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm6P62313 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm6P62313 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm6P62313 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm6P62313 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm6P62313 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Lsm6P62313 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm6P62313 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm6P62313 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm6P62313 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm6P62313 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.55■□□□□ 0.24
Lsm6P62313 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm6P62313 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm6P62313 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm6P62313 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.55■□□□□ 0.24
Lsm6P62313 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.55■□□□□ 0.24
Lsm6P62313 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm6P62313 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm6P62313 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm6P62313 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms