Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpne2P59108 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.95■□□□□ 0.14
Cpne2P59108 Gm9870-201ENSMUST00000063874 645 ntBASIC15.95■□□□□ 0.14
Cpne2P59108 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpne2P59108 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpne2P59108 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpne2P59108 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cpne2P59108 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpne2P59108 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpne2P59108 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpne2P59108 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpne2P59108 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cpne2P59108 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpne2P59108 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cpne2P59108 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpne2P59108 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cpne2P59108 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Cpne2P59108 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.94■□□□□ 0.14
Cpne2P59108 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cpne2P59108 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpne2P59108 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cpne2P59108 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpne2P59108 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Cpne2P59108 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpne2P59108 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cpne2P59108 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpne2P59108 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpne2P59108 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpne2P59108 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
Cpne2P59108 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cpne2P59108 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpne2P59108 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpne2P59108 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpne2P59108 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpne2P59108 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpne2P59108 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Cpne2P59108 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
Cpne2P59108 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpne2P59108 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Cpne2P59108 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpne2P59108 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpne2P59108 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpne2P59108 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpne2P59108 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpne2P59108 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpne2P59108 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpne2P59108 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpne2P59108 Gm9959-201ENSMUST00000068277 390 ntBASIC15.92■□□□□ 0.14
Cpne2P59108 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpne2P59108 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpne2P59108 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cpne2P59108 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpne2P59108 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpne2P59108 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cpne2P59108 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpne2P59108 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpne2P59108 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpne2P59108 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpne2P59108 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpne2P59108 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cpne2P59108 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cpne2P59108 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpne2P59108 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpne2P59108 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpne2P59108 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpne2P59108 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cpne2P59108 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cpne2P59108 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.91■□□□□ 0.14
Cpne2P59108 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.91■□□□□ 0.14
Cpne2P59108 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.91■□□□□ 0.14
Cpne2P59108 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cpne2P59108 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpne2P59108 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpne2P59108 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cpne2P59108 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpne2P59108 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cpne2P59108 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Cpne2P59108 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.9■□□□□ 0.14
Cpne2P59108 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.9■□□□□ 0.14
Cpne2P59108 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Cpne2P59108 Gm43530-201ENSMUST00000195920 274 ntBASIC15.9■□□□□ 0.14
Cpne2P59108 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.9■□□□□ 0.14
Cpne2P59108 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpne2P59108 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Cpne2P59108 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms