Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tubgcp3P58854 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Tubgcp3P58854 Gm27801-201ENSMUST00000184174 223 ntBASIC19.33■□□□□ 0.68
Tubgcp3P58854 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubgcp3P58854 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubgcp3P58854 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubgcp3P58854 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubgcp3P58854 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubgcp3P58854 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.33■□□□□ 0.68
Tubgcp3P58854 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubgcp3P58854 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.33■□□□□ 0.68
Tubgcp3P58854 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Tubgcp3P58854 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Tubgcp3P58854 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubgcp3P58854 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubgcp3P58854 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tubgcp3P58854 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp3P58854 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tubgcp3P58854 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubgcp3P58854 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Tubgcp3P58854 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.31■□□□□ 0.68
Tubgcp3P58854 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tubgcp3P58854 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tubgcp3P58854 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubgcp3P58854 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubgcp3P58854 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tubgcp3P58854 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tubgcp3P58854 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubgcp3P58854 Golph3-205ENSMUST00000228671 2842 ntBASIC19.31■□□□□ 0.68
Tubgcp3P58854 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tubgcp3P58854 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tubgcp3P58854 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.31■□□□□ 0.68
Tubgcp3P58854 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubgcp3P58854 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.3■□□□□ 0.68
Tubgcp3P58854 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubgcp3P58854 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubgcp3P58854 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Tubgcp3P58854 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubgcp3P58854 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubgcp3P58854 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubgcp3P58854 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubgcp3P58854 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tubgcp3P58854 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubgcp3P58854 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.29■□□□□ 0.68
Tubgcp3P58854 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubgcp3P58854 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubgcp3P58854 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubgcp3P58854 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms