Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.14■□□□□ 0.97
Tpm1P58771 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.14■□□□□ 0.97
Tpm1P58771 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tpm1P58771 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tpm1P58771 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Tpm1P58771 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Tpm1P58771 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tpm1P58771 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tpm1P58771 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tpm1P58771 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tpm1P58771 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tpm1P58771 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tpm1P58771 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tpm1P58771 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.13■□□□□ 0.97
Tpm1P58771 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tpm1P58771 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tpm1P58771 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tpm1P58771 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tpm1P58771 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tpm1P58771 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tpm1P58771 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tpm1P58771 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.12■□□□□ 0.97
Tpm1P58771 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tpm1P58771 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tpm1P58771 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tpm1P58771 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.12■□□□□ 0.97
Tpm1P58771 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tpm1P58771 Gm15820-201ENSMUST00000201566 728 ntBASIC21.12■□□□□ 0.97
Tpm1P58771 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tpm1P58771 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tpm1P58771 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Tpm1P58771 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.12■□□□□ 0.97
Tpm1P58771 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tpm1P58771 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tpm1P58771 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.11■□□□□ 0.97
Tpm1P58771 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tpm1P58771 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tpm1P58771 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tpm1P58771 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tpm1P58771 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tpm1P58771 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Tpm1P58771 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tpm1P58771 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Tpm1P58771 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Tpm1P58771 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Tpm1P58771 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tpm1P58771 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Tpm1P58771 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tpm1P58771 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Tpm1P58771 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.09■□□□□ 0.97
Tpm1P58771 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tpm1P58771 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tpm1P58771 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Tpm1P58771 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tpm1P58771 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tpm1P58771 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tpm1P58771 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tpm1P58771 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tpm1P58771 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
Tpm1P58771 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Tpm1P58771 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Tpm1P58771 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.09■□□□□ 0.97
Tpm1P58771 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.09■□□□□ 0.97
Tpm1P58771 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Tpm1P58771 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tpm1P58771 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Tpm1P58771 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.09■□□□□ 0.97
Tpm1P58771 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tpm1P58771 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tpm1P58771 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.09■□□□□ 0.97
Tpm1P58771 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tpm1P58771 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.09■□□□□ 0.97
Tpm1P58771 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tpm1P58771 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.08■□□□□ 0.97
Tpm1P58771 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Tpm1P58771 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tpm1P58771 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tpm1P58771 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.08■□□□□ 0.97
Tpm1P58771 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tpm1P58771 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.96
Tpm1P58771 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tpm1P58771 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tpm1P58771 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tpm1P58771 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms