Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Nkx2-1P50220 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-1P50220 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nkx2-1P50220 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-1P50220 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.72■□□□□ 0.11
Nkx2-1P50220 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Nkx2-1P50220 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-1P50220 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-1P50220 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-1P50220 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-1P50220 Grk6-206ENSMUST00000224995 2971 ntBASIC15.72■□□□□ 0.11
Nkx2-1P50220 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Nkx2-1P50220 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.11
Nkx2-1P50220 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-1P50220 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Nkx2-1P50220 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-1P50220 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-1P50220 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-1P50220 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-1P50220 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.71■□□□□ 0.11
Nkx2-1P50220 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.71■□□□□ 0.11
Nkx2-1P50220 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.71■□□□□ 0.11
Nkx2-1P50220 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-1P50220 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-1P50220 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Nkx2-1P50220 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-1P50220 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-1P50220 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Nkx2-1P50220 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Nkx2-1P50220 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkx2-1P50220 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkx2-1P50220 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.7■□□□□ 0.1
Nkx2-1P50220 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-1P50220 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-1P50220 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-1P50220 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.68■□□□□ 0.1
Nkx2-1P50220 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-1P50220 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-1P50220 Gm7417-201ENSMUST00000192950 473 ntBASIC15.68■□□□□ 0.1
Nkx2-1P50220 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.68■□□□□ 0.1
Nkx2-1P50220 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-1P50220 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-1P50220 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Nkx2-1P50220 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.68■□□□□ 0.1
Nkx2-1P50220 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-1P50220 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-1P50220 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-1P50220 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-1P50220 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.67■□□□□ 0.1
Nkx2-1P50220 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-1P50220 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.67■□□□□ 0.1
Nkx2-1P50220 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-1P50220 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nkx2-1P50220 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-1P50220 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-1P50220 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nkx2-1P50220 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nkx2-1P50220 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.67■□□□□ 0.1
Nkx2-1P50220 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-1P50220 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-1P50220 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms