Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Brca1P48754 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Brca1P48754 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Brca1P48754 Gm9987-201ENSMUST00000069768 567 ntBASIC21.65■■□□□ 1.06
Brca1P48754 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Brca1P48754 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Brca1P48754 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Brca1P48754 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Brca1P48754 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.64■■□□□ 1.05
Brca1P48754 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Brca1P48754 Gm2399-201ENSMUST00000104944 225 ntBASIC21.64■■□□□ 1.05
Brca1P48754 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.64■■□□□ 1.05
Brca1P48754 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Brca1P48754 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.63■■□□□ 1.05
Brca1P48754 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Brca1P48754 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Brca1P48754 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Brca1P48754 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Brca1P48754 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.63■■□□□ 1.05
Brca1P48754 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Brca1P48754 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Brca1P48754 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.63■■□□□ 1.05
Brca1P48754 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Brca1P48754 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Brca1P48754 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Brca1P48754 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Brca1P48754 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.62■■□□□ 1.05
Brca1P48754 Gm43799-201ENSMUST00000201845 579 ntBASIC21.62■■□□□ 1.05
Brca1P48754 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Brca1P48754 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.62■■□□□ 1.05
Brca1P48754 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Brca1P48754 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Brca1P48754 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.62■■□□□ 1.05
Brca1P48754 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Brca1P48754 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Brca1P48754 Gm10231-201ENSMUST00000181584 441 ntBASIC21.62■■□□□ 1.05
Brca1P48754 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Brca1P48754 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.62■■□□□ 1.05
Brca1P48754 Gm10175-202ENSMUST00000208752 441 ntBASIC21.62■■□□□ 1.05
Brca1P48754 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Brca1P48754 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Brca1P48754 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Brca1P48754 Gm10819-201ENSMUST00000099988 561 ntBASIC21.62■■□□□ 1.05
Brca1P48754 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Brca1P48754 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Brca1P48754 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Brca1P48754 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Brca1P48754 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.61■■□□□ 1.05
Brca1P48754 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.61■■□□□ 1.05
Brca1P48754 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Brca1P48754 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
Brca1P48754 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Brca1P48754 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Brca1P48754 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.6■■□□□ 1.05
Brca1P48754 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.6■■□□□ 1.05
Brca1P48754 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.6■■□□□ 1.05
Brca1P48754 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.6■■□□□ 1.05
Brca1P48754 Gm44549-201ENSMUST00000208351 577 ntBASIC21.6■■□□□ 1.05
Brca1P48754 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Brca1P48754 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Brca1P48754 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Brca1P48754 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Brca1P48754 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Brca1P48754 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Brca1P48754 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Brca1P48754 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Brca1P48754 Gm15378-201ENSMUST00000121894 207 ntBASIC21.59■■□□□ 1.05
Brca1P48754 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.59■■□□□ 1.05
Brca1P48754 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.59■■□□□ 1.05
Brca1P48754 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Brca1P48754 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Brca1P48754 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.59■■□□□ 1.05
Brca1P48754 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Brca1P48754 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Brca1P48754 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Brca1P48754 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Brca1P48754 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Brca1P48754 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Brca1P48754 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Brca1P48754 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Brca1P48754 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Brca1P48754 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.58■■□□□ 1.05
Brca1P48754 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Brca1P48754 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Brca1P48754 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Brca1P48754 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.57■■□□□ 1.04
Brca1P48754 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.57■■□□□ 1.04
Brca1P48754 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Brca1P48754 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Brca1P48754 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Brca1P48754 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Brca1P48754 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Brca1P48754 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Brca1P48754 Gm13158-201ENSMUST00000122007 736 ntBASIC21.57■■□□□ 1.04
Brca1P48754 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.57■■□□□ 1.04
Brca1P48754 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.57■■□□□ 1.04
Brca1P48754 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Brca1P48754 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Brca1P48754 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Brca1P48754 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms