Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox6P40645 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox6P40645 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sox6P40645 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox6P40645 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox6P40645 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox6P40645 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.73■□□□□ 0.43
Sox6P40645 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox6P40645 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sox6P40645 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox6P40645 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.73■□□□□ 0.43
Sox6P40645 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.73■□□□□ 0.43
Sox6P40645 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.73■□□□□ 0.43
Sox6P40645 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sox6P40645 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox6P40645 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox6P40645 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox6P40645 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.72■□□□□ 0.43
Sox6P40645 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.72■□□□□ 0.43
Sox6P40645 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sox6P40645 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Sox6P40645 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sox6P40645 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox6P40645 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sox6P40645 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox6P40645 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox6P40645 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sox6P40645 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Sox6P40645 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox6P40645 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox6P40645 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox6P40645 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox6P40645 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sox6P40645 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox6P40645 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox6P40645 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sox6P40645 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox6P40645 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox6P40645 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox6P40645 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox6P40645 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.71■□□□□ 0.43
Sox6P40645 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Sox6P40645 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox6P40645 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox6P40645 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox6P40645 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox6P40645 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Sox6P40645 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox6P40645 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox6P40645 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.7■□□□□ 0.42
Sox6P40645 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox6P40645 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox6P40645 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox6P40645 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sox6P40645 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox6P40645 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Sox6P40645 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sox6P40645 Gm45417-201ENSMUST00000209533 758 ntBASIC17.7■□□□□ 0.42
Sox6P40645 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Sox6P40645 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox6P40645 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Sox6P40645 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox6P40645 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox6P40645 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox6P40645 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox6P40645 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox6P40645 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox6P40645 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sox6P40645 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox6P40645 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox6P40645 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox6P40645 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox6P40645 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox6P40645 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox6P40645 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Sox6P40645 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox6P40645 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox6P40645 Mir7075-201ENSMUST00000184187 82 ntBASIC17.69■□□□□ 0.42
Sox6P40645 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox6P40645 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.69■□□□□ 0.42
Sox6P40645 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox6P40645 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox6P40645 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox6P40645 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox6P40645 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox6P40645 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox6P40645 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox6P40645 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox6P40645 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Sox6P40645 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox6P40645 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Sox6P40645 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.68■□□□□ 0.42
Sox6P40645 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox6P40645 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox6P40645 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox6P40645 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sox6P40645 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox6P40645 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox6P40645 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox6P40645 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms