Protein–RNA interactions for Protein: P15533

Trim30a, Tripartite motif-containing protein 30A, mousemouse

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30aP15533 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim30aP15533 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Trim30aP15533 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim30aP15533 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim30aP15533 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim30aP15533 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trim30aP15533 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.9■□□□□ 0.94
Trim30aP15533 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.9■□□□□ 0.94
Trim30aP15533 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim30aP15533 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Trim30aP15533 Fst-202ENSMUST00000223640 2612 ntBASIC20.9■□□□□ 0.94
Trim30aP15533 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trim30aP15533 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Trim30aP15533 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim30aP15533 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim30aP15533 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.89■□□□□ 0.93
Trim30aP15533 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim30aP15533 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim30aP15533 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim30aP15533 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Trim30aP15533 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim30aP15533 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.88■□□□□ 0.93
Trim30aP15533 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.88■□□□□ 0.93
Trim30aP15533 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim30aP15533 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim30aP15533 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim30aP15533 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim30aP15533 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim30aP15533 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim30aP15533 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.88■□□□□ 0.93
Trim30aP15533 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim30aP15533 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim30aP15533 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim30aP15533 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim30aP15533 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30aP15533 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trim30aP15533 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30aP15533 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30aP15533 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30aP15533 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30aP15533 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.87■□□□□ 0.93
Trim30aP15533 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trim30aP15533 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Trim30aP15533 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30aP15533 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30aP15533 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30aP15533 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30aP15533 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30aP15533 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30aP15533 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30aP15533 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Trim30aP15533 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30aP15533 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30aP15533 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30aP15533 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30aP15533 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30aP15533 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30aP15533 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30aP15533 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trim30aP15533 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Trim30aP15533 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.85■□□□□ 0.93
Trim30aP15533 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.85■□□□□ 0.93
Trim30aP15533 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30aP15533 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30aP15533 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30aP15533 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.85■□□□□ 0.93
Trim30aP15533 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.85■□□□□ 0.93
Trim30aP15533 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30aP15533 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30aP15533 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30aP15533 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30aP15533 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30aP15533 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.84■□□□□ 0.93
Trim30aP15533 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Trim30aP15533 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim30aP15533 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30aP15533 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30aP15533 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30aP15533 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30aP15533 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30aP15533 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30aP15533 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30aP15533 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30aP15533 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30aP15533 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim30aP15533 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.83■□□□□ 0.93
Trim30aP15533 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim30aP15533 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim30aP15533 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim30aP15533 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Trim30aP15533 Gm16437-201ENSMUST00000025669 507 ntBASIC20.83■□□□□ 0.93
Trim30aP15533 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trim30aP15533 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Trim30aP15533 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim30aP15533 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim30aP15533 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim30aP15533 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim30aP15533 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim30aP15533 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.83■□□□□ 0.92
Trim30aP15533 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms