Protein–RNA interactions for Protein: P0CB42

Alkbh1, Nucleic acid dioxygenase ALKBH1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alkbh1P0CB42 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alkbh1P0CB42 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alkbh1P0CB42 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.29■□□□□ 0.84
Alkbh1P0CB42 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alkbh1P0CB42 Gm10493-201ENSMUST00000097270 612 ntBASIC20.29■□□□□ 0.84
Alkbh1P0CB42 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Alkbh1P0CB42 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Alkbh1P0CB42 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Alkbh1P0CB42 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alkbh1P0CB42 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alkbh1P0CB42 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Alkbh1P0CB42 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Alkbh1P0CB42 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Alkbh1P0CB42 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.28■□□□□ 0.84
Alkbh1P0CB42 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alkbh1P0CB42 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alkbh1P0CB42 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alkbh1P0CB42 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alkbh1P0CB42 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.28■□□□□ 0.84
Alkbh1P0CB42 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alkbh1P0CB42 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Alkbh1P0CB42 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Alkbh1P0CB42 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alkbh1P0CB42 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alkbh1P0CB42 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Alkbh1P0CB42 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.27■□□□□ 0.84
Alkbh1P0CB42 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alkbh1P0CB42 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Alkbh1P0CB42 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alkbh1P0CB42 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alkbh1P0CB42 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alkbh1P0CB42 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.27■□□□□ 0.84
Alkbh1P0CB42 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Alkbh1P0CB42 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Alkbh1P0CB42 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Alkbh1P0CB42 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alkbh1P0CB42 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Alkbh1P0CB42 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Alkbh1P0CB42 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.26■□□□□ 0.83
Alkbh1P0CB42 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.26■□□□□ 0.83
Alkbh1P0CB42 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Alkbh1P0CB42 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Alkbh1P0CB42 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alkbh1P0CB42 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Alkbh1P0CB42 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.26■□□□□ 0.83
Alkbh1P0CB42 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alkbh1P0CB42 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Alkbh1P0CB42 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Alkbh1P0CB42 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Alkbh1P0CB42 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alkbh1P0CB42 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alkbh1P0CB42 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
Alkbh1P0CB42 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.25■□□□□ 0.83
Alkbh1P0CB42 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.25■□□□□ 0.83
Alkbh1P0CB42 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.25■□□□□ 0.83
Alkbh1P0CB42 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.25■□□□□ 0.83
Alkbh1P0CB42 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alkbh1P0CB42 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Alkbh1P0CB42 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Alkbh1P0CB42 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Alkbh1P0CB42 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alkbh1P0CB42 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Alkbh1P0CB42 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alkbh1P0CB42 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Alkbh1P0CB42 Gm13234-201ENSMUST00000120010 747 ntBASIC20.24■□□□□ 0.83
Alkbh1P0CB42 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.24■□□□□ 0.83
Alkbh1P0CB42 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Alkbh1P0CB42 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.24■□□□□ 0.83
Alkbh1P0CB42 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alkbh1P0CB42 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alkbh1P0CB42 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Alkbh1P0CB42 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alkbh1P0CB42 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alkbh1P0CB42 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Gm13146-201ENSMUST00000118508 780 ntBASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alkbh1P0CB42 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alkbh1P0CB42 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alkbh1P0CB42 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alkbh1P0CB42 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alkbh1P0CB42 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alkbh1P0CB42 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alkbh1P0CB42 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alkbh1P0CB42 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Alkbh1P0CB42 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms