Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Krt1P04104 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.99■□□□□ 0.47
Krt1P04104 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Krt1P04104 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Krt1P04104 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.99■□□□□ 0.47
Krt1P04104 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Krt1P04104 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Krt1P04104 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.98■□□□□ 0.47
Krt1P04104 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Krt1P04104 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Krt1P04104 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Krt1P04104 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Krt1P04104 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Krt1P04104 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Krt1P04104 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Krt1P04104 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Krt1P04104 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Krt1P04104 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Krt1P04104 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Krt1P04104 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Krt1P04104 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Krt1P04104 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Krt1P04104 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.97■□□□□ 0.47
Krt1P04104 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Krt1P04104 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Krt1P04104 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Krt1P04104 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Krt1P04104 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Krt1P04104 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Krt1P04104 AA386476-201ENSMUST00000098781 1665 ntBASIC17.97■□□□□ 0.47
Krt1P04104 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Krt1P04104 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Krt1P04104 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Krt1P04104 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Krt1P04104 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Krt1P04104 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Krt1P04104 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Krt1P04104 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Krt1P04104 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Krt1P04104 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Krt1P04104 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Krt1P04104 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.96■□□□□ 0.47
Krt1P04104 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Krt1P04104 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Krt1P04104 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Krt1P04104 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Krt1P04104 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Krt1P04104 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Krt1P04104 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.95■□□□□ 0.46
Krt1P04104 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Krt1P04104 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Krt1P04104 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Krt1P04104 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Krt1P04104 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Krt1P04104 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.95■□□□□ 0.46
Krt1P04104 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Krt1P04104 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Krt1P04104 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Krt1P04104 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Krt1P04104 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Krt1P04104 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.94■□□□□ 0.46
Krt1P04104 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.94■□□□□ 0.46
Krt1P04104 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.94■□□□□ 0.46
Krt1P04104 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Krt1P04104 Gm10399-202ENSMUST00000202768 748 ntBASIC17.94■□□□□ 0.46
Krt1P04104 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Krt1P04104 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Krt1P04104 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Krt1P04104 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Krt1P04104 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Krt1P04104 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Krt1P04104 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Krt1P04104 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Krt1P04104 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.94■□□□□ 0.46
Krt1P04104 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Krt1P04104 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Krt1P04104 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Krt1P04104 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Krt1P04104 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.93■□□□□ 0.46
Krt1P04104 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Krt1P04104 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.93■□□□□ 0.46
Krt1P04104 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Krt1P04104 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Krt1P04104 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.93■□□□□ 0.46
Krt1P04104 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Krt1P04104 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Krt1P04104 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Krt1P04104 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Krt1P04104 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Krt1P04104 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Krt1P04104 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt1P04104 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Krt1P04104 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt1P04104 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Krt1P04104 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Krt1P04104 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt1P04104 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt1P04104 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt1P04104 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Krt1P04104 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms