Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sp1O89090 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.26■□□□□ 0.67
Sp1O89090 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sp1O89090 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sp1O89090 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Sp1O89090 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sp1O89090 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sp1O89090 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sp1O89090 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sp1O89090 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sp1O89090 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sp1O89090 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sp1O89090 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sp1O89090 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sp1O89090 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sp1O89090 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.25■□□□□ 0.67
Sp1O89090 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.25■□□□□ 0.67
Sp1O89090 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.25■□□□□ 0.67
Sp1O89090 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sp1O89090 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sp1O89090 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sp1O89090 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sp1O89090 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.24■□□□□ 0.67
Sp1O89090 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sp1O89090 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sp1O89090 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.24■□□□□ 0.67
Sp1O89090 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sp1O89090 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sp1O89090 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sp1O89090 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sp1O89090 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sp1O89090 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp1O89090 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp1O89090 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp1O89090 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sp1O89090 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sp1O89090 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp1O89090 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.23■□□□□ 0.67
Sp1O89090 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp1O89090 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp1O89090 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp1O89090 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp1O89090 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sp1O89090 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp1O89090 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp1O89090 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.22■□□□□ 0.67
Sp1O89090 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sp1O89090 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sp1O89090 Gm6211-202ENSMUST00000167849 925 ntBASIC19.22■□□□□ 0.67
Sp1O89090 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sp1O89090 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sp1O89090 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sp1O89090 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sp1O89090 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sp1O89090 Golph3-202ENSMUST00000226517 2359 ntBASIC19.21■□□□□ 0.67
Sp1O89090 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sp1O89090 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sp1O89090 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Sp1O89090 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
Sp1O89090 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sp1O89090 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Sp1O89090 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sp1O89090 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sp1O89090 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sp1O89090 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sp1O89090 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sp1O89090 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp1O89090 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp1O89090 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp1O89090 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sp1O89090 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp1O89090 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp1O89090 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.2■□□□□ 0.66
Sp1O89090 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp1O89090 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp1O89090 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp1O89090 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp1O89090 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Sp1O89090 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sp1O89090 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Sp1O89090 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp1O89090 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Sp1O89090 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Sp1O89090 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Sp1O89090 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sp1O89090 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sp1O89090 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Sp1O89090 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sp1O89090 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sp1O89090 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sp1O89090 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sp1O89090 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sp1O89090 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sp1O89090 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Sp1O89090 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.18■□□□□ 0.66
Sp1O89090 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.18■□□□□ 0.66
Sp1O89090 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.18■□□□□ 0.66
Sp1O89090 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.18■□□□□ 0.66
Sp1O89090 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.18■□□□□ 0.66
Sp1O89090 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms