Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syn1O88935 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syn1O88935 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Syn1O88935 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syn1O88935 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Syn1O88935 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
Syn1O88935 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Syn1O88935 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Syn1O88935 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syn1O88935 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Syn1O88935 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Syn1O88935 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syn1O88935 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syn1O88935 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Syn1O88935 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syn1O88935 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syn1O88935 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syn1O88935 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syn1O88935 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Syn1O88935 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.59■□□□□ 0.73
Syn1O88935 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syn1O88935 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Syn1O88935 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syn1O88935 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Syn1O88935 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syn1O88935 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.58■□□□□ 0.73
Syn1O88935 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syn1O88935 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syn1O88935 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syn1O88935 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syn1O88935 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syn1O88935 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syn1O88935 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syn1O88935 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syn1O88935 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syn1O88935 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Syn1O88935 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syn1O88935 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Syn1O88935 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.58■□□□□ 0.72
Syn1O88935 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Syn1O88935 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Syn1O88935 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Syn1O88935 Gm5417-201ENSMUST00000079706 384 ntBASIC19.58■□□□□ 0.72
Syn1O88935 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Syn1O88935 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.58■□□□□ 0.72
Syn1O88935 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Syn1O88935 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Syn1O88935 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Syn1O88935 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Syn1O88935 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Syn1O88935 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Syn1O88935 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Syn1O88935 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Syn1O88935 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Syn1O88935 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Syn1O88935 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Syn1O88935 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Syn1O88935 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Syn1O88935 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Syn1O88935 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Syn1O88935 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Syn1O88935 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
Syn1O88935 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.56■□□□□ 0.72
Syn1O88935 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Syn1O88935 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Syn1O88935 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.56■□□□□ 0.72
Syn1O88935 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Syn1O88935 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.56■□□□□ 0.72
Syn1O88935 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Syn1O88935 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Syn1O88935 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Syn1O88935 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.56■□□□□ 0.72
Syn1O88935 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.56■□□□□ 0.72
Syn1O88935 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Syn1O88935 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Syn1O88935 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Syn1O88935 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Syn1O88935 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.55■□□□□ 0.72
Syn1O88935 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.55■□□□□ 0.72
Syn1O88935 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Syn1O88935 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Syn1O88935 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Syn1O88935 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Syn1O88935 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Syn1O88935 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Syn1O88935 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Syn1O88935 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.55■□□□□ 0.72
Syn1O88935 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Syn1O88935 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Syn1O88935 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Syn1O88935 Gm2399-201ENSMUST00000104944 225 ntBASIC19.54■□□□□ 0.72
Syn1O88935 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Syn1O88935 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.54■□□□□ 0.72
Syn1O88935 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.54■□□□□ 0.72
Syn1O88935 Mir5122-201ENSMUST00000175004 89 ntBASIC19.54■□□□□ 0.72
Syn1O88935 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Syn1O88935 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Syn1O88935 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Syn1O88935 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Syn1O88935 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms