Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
IkbkbO88351 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
IkbkbO88351 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.95■□□□□ 0.94
IkbkbO88351 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IkbkbO88351 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IkbkbO88351 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IkbkbO88351 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.95■□□□□ 0.94
IkbkbO88351 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.95■□□□□ 0.94
IkbkbO88351 AA386476-201ENSMUST00000098781 1665 ntBASIC20.95■□□□□ 0.94
IkbkbO88351 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
IkbkbO88351 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
IkbkbO88351 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.95■□□□□ 0.94
IkbkbO88351 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IkbkbO88351 Gm10849-201ENSMUST00000100397 618 ntBASIC20.94■□□□□ 0.94
IkbkbO88351 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IkbkbO88351 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.94■□□□□ 0.94
IkbkbO88351 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IkbkbO88351 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.94■□□□□ 0.94
IkbkbO88351 Gm10033-202ENSMUST00000211874 928 ntBASIC20.94■□□□□ 0.94
IkbkbO88351 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IkbkbO88351 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IkbkbO88351 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
IkbkbO88351 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
IkbkbO88351 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.94■□□□□ 0.94
IkbkbO88351 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IkbkbO88351 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IkbkbO88351 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IkbkbO88351 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
IkbkbO88351 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IkbkbO88351 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IkbkbO88351 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IkbkbO88351 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.93■□□□□ 0.94
IkbkbO88351 Gm18671-201ENSMUST00000214826 683 ntBASIC20.93■□□□□ 0.94
IkbkbO88351 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
IkbkbO88351 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IkbkbO88351 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
IkbkbO88351 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
IkbkbO88351 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IkbkbO88351 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IkbkbO88351 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.92■□□□□ 0.94
IkbkbO88351 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.92■□□□□ 0.94
IkbkbO88351 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IkbkbO88351 Gm7291-201ENSMUST00000199147 382 ntBASIC20.92■□□□□ 0.94
IkbkbO88351 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.92■□□□□ 0.94
IkbkbO88351 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
IkbkbO88351 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IkbkbO88351 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IkbkbO88351 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.92■□□□□ 0.94
IkbkbO88351 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IkbkbO88351 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
IkbkbO88351 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IkbkbO88351 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
IkbkbO88351 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IkbkbO88351 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IkbkbO88351 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IkbkbO88351 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.91■□□□□ 0.94
IkbkbO88351 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
IkbkbO88351 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IkbkbO88351 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.9■□□□□ 0.94
IkbkbO88351 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
IkbkbO88351 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
IkbkbO88351 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IkbkbO88351 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IkbkbO88351 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IkbkbO88351 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IkbkbO88351 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IkbkbO88351 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
IkbkbO88351 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
IkbkbO88351 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IkbkbO88351 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.89■□□□□ 0.93
IkbkbO88351 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
IkbkbO88351 Gm27405-201ENSMUST00000184201 112 ntBASIC20.89■□□□□ 0.93
IkbkbO88351 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.89■□□□□ 0.93
IkbkbO88351 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.89■□□□□ 0.93
IkbkbO88351 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IkbkbO88351 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
IkbkbO88351 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
IkbkbO88351 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
IkbkbO88351 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IkbkbO88351 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IkbkbO88351 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
IkbkbO88351 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
IkbkbO88351 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IkbkbO88351 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.88■□□□□ 0.93
IkbkbO88351 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
IkbkbO88351 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IkbkbO88351 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
IkbkbO88351 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
IkbkbO88351 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.88■□□□□ 0.93
IkbkbO88351 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.88■□□□□ 0.93
IkbkbO88351 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IkbkbO88351 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.88■□□□□ 0.93
IkbkbO88351 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IkbkbO88351 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IkbkbO88351 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
IkbkbO88351 Reep4-203ENSMUST00000226563 1444 ntBASIC20.87■□□□□ 0.93
IkbkbO88351 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IkbkbO88351 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
IkbkbO88351 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
IkbkbO88351 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms