Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh16O88338 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cdh16O88338 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh16O88338 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh16O88338 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Cdh16O88338 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh16O88338 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh16O88338 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cdh16O88338 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh16O88338 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh16O88338 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cdh16O88338 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Cdh16O88338 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh16O88338 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh16O88338 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.56■□□□□ 0.56
Cdh16O88338 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.56■□□□□ 0.56
Cdh16O88338 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh16O88338 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh16O88338 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh16O88338 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh16O88338 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh16O88338 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh16O88338 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Cdh16O88338 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh16O88338 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.55■□□□□ 0.56
Cdh16O88338 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh16O88338 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh16O88338 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cdh16O88338 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh16O88338 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh16O88338 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh16O88338 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh16O88338 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.54■□□□□ 0.56
Cdh16O88338 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.54■□□□□ 0.56
Cdh16O88338 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdh16O88338 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdh16O88338 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh16O88338 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh16O88338 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Cdh16O88338 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.53■□□□□ 0.56
Cdh16O88338 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh16O88338 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.53■□□□□ 0.56
Cdh16O88338 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cdh16O88338 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cdh16O88338 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh16O88338 Etf1-202ENSMUST00000180351 108 ntBASIC18.53■□□□□ 0.56
Cdh16O88338 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.53■□□□□ 0.56
Cdh16O88338 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh16O88338 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh16O88338 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh16O88338 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh16O88338 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh16O88338 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh16O88338 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh16O88338 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh16O88338 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh16O88338 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh16O88338 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh16O88338 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh16O88338 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh16O88338 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.52■□□□□ 0.56
Cdh16O88338 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.52■□□□□ 0.56
Cdh16O88338 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.52■□□□□ 0.56
Cdh16O88338 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdh16O88338 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh16O88338 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdh16O88338 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.52■□□□□ 0.55
Cdh16O88338 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Cdh16O88338 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh16O88338 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Cdh16O88338 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cdh16O88338 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh16O88338 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh16O88338 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh16O88338 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.51■□□□□ 0.55
Cdh16O88338 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh16O88338 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh16O88338 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh16O88338 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.51■□□□□ 0.55
Cdh16O88338 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh16O88338 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh16O88338 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh16O88338 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.5■□□□□ 0.55
Cdh16O88338 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Cdh16O88338 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh16O88338 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cdh16O88338 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh16O88338 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh16O88338 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.5■□□□□ 0.55
Cdh16O88338 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh16O88338 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Cdh16O88338 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.5■□□□□ 0.55
Cdh16O88338 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh16O88338 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh16O88338 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh16O88338 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh16O88338 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh16O88338 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cdh16O88338 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh16O88338 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms