Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim3O70209 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim3O70209 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.17■□□□□ 0.34
Pdlim3O70209 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.17■□□□□ 0.34
Pdlim3O70209 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim3O70209 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim3O70209 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim3O70209 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim3O70209 Gm5812-201ENSMUST00000061073 957 ntBASIC17.17■□□□□ 0.34
Pdlim3O70209 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
Pdlim3O70209 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim3O70209 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim3O70209 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim3O70209 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim3O70209 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim3O70209 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim3O70209 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim3O70209 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Pdlim3O70209 Gm15546-201ENSMUST00000122095 826 ntBASIC17.16■□□□□ 0.34
Pdlim3O70209 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pdlim3O70209 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.16■□□□□ 0.34
Pdlim3O70209 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim3O70209 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim3O70209 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim3O70209 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim3O70209 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim3O70209 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim3O70209 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim3O70209 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim3O70209 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim3O70209 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim3O70209 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim3O70209 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim3O70209 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.15■□□□□ 0.34
Pdlim3O70209 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim3O70209 Gm9959-201ENSMUST00000068277 390 ntBASIC17.15■□□□□ 0.34
Pdlim3O70209 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim3O70209 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.15■□□□□ 0.34
Pdlim3O70209 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim3O70209 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim3O70209 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim3O70209 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pdlim3O70209 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim3O70209 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.15■□□□□ 0.34
Pdlim3O70209 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim3O70209 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pdlim3O70209 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim3O70209 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pdlim3O70209 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.14■□□□□ 0.33
Pdlim3O70209 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim3O70209 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.14■□□□□ 0.33
Pdlim3O70209 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.14■□□□□ 0.33
Pdlim3O70209 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim3O70209 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim3O70209 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim3O70209 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim3O70209 Grk6-206ENSMUST00000224995 2971 ntBASIC17.14■□□□□ 0.33
Pdlim3O70209 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim3O70209 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim3O70209 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pdlim3O70209 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim3O70209 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim3O70209 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pdlim3O70209 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim3O70209 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim3O70209 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim3O70209 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pdlim3O70209 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim3O70209 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim3O70209 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim3O70209 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim3O70209 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim3O70209 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim3O70209 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pdlim3O70209 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pdlim3O70209 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pdlim3O70209 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pdlim3O70209 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim3O70209 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.12■□□□□ 0.33
Pdlim3O70209 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
Pdlim3O70209 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
Pdlim3O70209 Rarb-207ENSMUST00000225921 2756 ntBASIC17.12■□□□□ 0.33
Pdlim3O70209 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.12■□□□□ 0.33
Pdlim3O70209 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.12■□□□□ 0.33
Pdlim3O70209 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pdlim3O70209 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim3O70209 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim3O70209 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim3O70209 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim3O70209 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.11■□□□□ 0.33
Pdlim3O70209 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim3O70209 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim3O70209 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim3O70209 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pdlim3O70209 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim3O70209 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim3O70209 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim3O70209 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.11■□□□□ 0.33
Pdlim3O70209 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.11■□□□□ 0.33
Pdlim3O70209 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms