Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl35aO55142 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl35aO55142 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl35aO55142 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl35aO55142 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl35aO55142 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
Rpl35aO55142 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rpl35aO55142 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.11□□□□□ -0.15
Rpl35aO55142 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl35aO55142 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl35aO55142 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl35aO55142 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl35aO55142 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl35aO55142 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rpl35aO55142 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl35aO55142 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl35aO55142 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl35aO55142 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl35aO55142 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rpl35aO55142 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl35aO55142 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl35aO55142 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.1□□□□□ -0.15
Rpl35aO55142 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.1□□□□□ -0.15
Rpl35aO55142 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl35aO55142 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rpl35aO55142 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl35aO55142 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl35aO55142 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl35aO55142 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Rpl35aO55142 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.1□□□□□ -0.15
Rpl35aO55142 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl35aO55142 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl35aO55142 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rpl35aO55142 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl35aO55142 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Rpl35aO55142 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl35aO55142 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl35aO55142 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl35aO55142 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rpl35aO55142 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl35aO55142 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.09□□□□□ -0.15
Rpl35aO55142 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl35aO55142 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl35aO55142 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.09□□□□□ -0.15
Rpl35aO55142 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl35aO55142 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.09□□□□□ -0.15
Rpl35aO55142 Gm26571-201ENSMUST00000181399 666 ntBASIC14.09□□□□□ -0.15
Rpl35aO55142 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.09□□□□□ -0.15
Rpl35aO55142 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl35aO55142 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl35aO55142 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl35aO55142 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rpl35aO55142 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl35aO55142 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl35aO55142 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl35aO55142 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rpl35aO55142 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Rpl35aO55142 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rpl35aO55142 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Rpl35aO55142 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.08□□□□□ -0.16
Rpl35aO55142 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rpl35aO55142 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl35aO55142 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl35aO55142 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.08□□□□□ -0.16
Rpl35aO55142 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.08□□□□□ -0.16
Rpl35aO55142 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl35aO55142 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.08□□□□□ -0.16
Rpl35aO55142 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl35aO55142 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.08□□□□□ -0.16
Rpl35aO55142 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl35aO55142 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl35aO55142 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl35aO55142 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl35aO55142 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rpl35aO55142 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Rpl35aO55142 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl35aO55142 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl35aO55142 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl35aO55142 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl35aO55142 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl35aO55142 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rpl35aO55142 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl35aO55142 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl35aO55142 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl35aO55142 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl35aO55142 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl35aO55142 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl35aO55142 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl35aO55142 Gm13234-201ENSMUST00000120010 747 ntBASIC14.06□□□□□ -0.16
Rpl35aO55142 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rpl35aO55142 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.06□□□□□ -0.16
Rpl35aO55142 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl35aO55142 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rpl35aO55142 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
Rpl35aO55142 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Rpl35aO55142 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rpl35aO55142 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl35aO55142 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl35aO55142 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl35aO55142 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms