Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prom1O54990 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prom1O54990 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Prom1O54990 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Prom1O54990 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Prom1O54990 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Prom1O54990 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Prom1O54990 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prom1O54990 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prom1O54990 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prom1O54990 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prom1O54990 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prom1O54990 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.03■□□□□ 0.96
Prom1O54990 Mir7071-201ENSMUST00000184847 69 ntBASIC21.03■□□□□ 0.96
Prom1O54990 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.03■□□□□ 0.96
Prom1O54990 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.03■□□□□ 0.96
Prom1O54990 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.03■□□□□ 0.96
Prom1O54990 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prom1O54990 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prom1O54990 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prom1O54990 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Prom1O54990 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Prom1O54990 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prom1O54990 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prom1O54990 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.02■□□□□ 0.96
Prom1O54990 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Prom1O54990 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prom1O54990 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prom1O54990 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prom1O54990 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prom1O54990 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prom1O54990 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Prom1O54990 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prom1O54990 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Prom1O54990 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.01■□□□□ 0.95
Prom1O54990 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.01■□□□□ 0.95
Prom1O54990 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prom1O54990 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prom1O54990 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prom1O54990 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prom1O54990 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.01■□□□□ 0.95
Prom1O54990 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prom1O54990 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Prom1O54990 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prom1O54990 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prom1O54990 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Prom1O54990 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prom1O54990 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Prom1O54990 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21■□□□□ 0.95
Prom1O54990 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21■□□□□ 0.95
Prom1O54990 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21■□□□□ 0.95
Prom1O54990 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prom1O54990 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prom1O54990 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21■□□□□ 0.95
Prom1O54990 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prom1O54990 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21■□□□□ 0.95
Prom1O54990 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prom1O54990 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prom1O54990 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prom1O54990 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prom1O54990 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prom1O54990 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prom1O54990 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Prom1O54990 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Prom1O54990 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Prom1O54990 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prom1O54990 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prom1O54990 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Prom1O54990 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prom1O54990 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prom1O54990 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.98■□□□□ 0.95
Prom1O54990 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Prom1O54990 Mir6982-201ENSMUST00000184354 68 ntBASIC20.98■□□□□ 0.95
Prom1O54990 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Prom1O54990 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prom1O54990 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prom1O54990 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.97■□□□□ 0.95
Prom1O54990 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.97■□□□□ 0.95
Prom1O54990 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prom1O54990 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Prom1O54990 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prom1O54990 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prom1O54990 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prom1O54990 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.96■□□□□ 0.95
Prom1O54990 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prom1O54990 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Prom1O54990 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Prom1O54990 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.96■□□□□ 0.95
Prom1O54990 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prom1O54990 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prom1O54990 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Prom1O54990 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prom1O54990 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prom1O54990 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.95■□□□□ 0.94
Prom1O54990 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.95■□□□□ 0.94
Prom1O54990 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.95■□□□□ 0.94
Prom1O54990 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Prom1O54990 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prom1O54990 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Prom1O54990 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms