Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.26■□□□□ 0.67
Limk2O54785 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Limk2O54785 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Limk2O54785 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Limk2O54785 Gm13234-201ENSMUST00000120010 747 ntBASIC19.26■□□□□ 0.67
Limk2O54785 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.26■□□□□ 0.67
Limk2O54785 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Limk2O54785 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Limk2O54785 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Limk2O54785 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Limk2O54785 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Limk2O54785 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Limk2O54785 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Limk2O54785 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Limk2O54785 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Limk2O54785 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Limk2O54785 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.25■□□□□ 0.67
Limk2O54785 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Limk2O54785 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Limk2O54785 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Limk2O54785 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Limk2O54785 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Limk2O54785 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Limk2O54785 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Limk2O54785 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Limk2O54785 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Limk2O54785 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Limk2O54785 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Limk2O54785 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.24■□□□□ 0.67
Limk2O54785 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Limk2O54785 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Limk2O54785 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Limk2O54785 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.24■□□□□ 0.67
Limk2O54785 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Limk2O54785 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Limk2O54785 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Limk2O54785 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Limk2O54785 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Limk2O54785 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Limk2O54785 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Limk2O54785 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.23■□□□□ 0.67
Limk2O54785 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.23■□□□□ 0.67
Limk2O54785 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Limk2O54785 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Limk2O54785 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.23■□□□□ 0.67
Limk2O54785 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Limk2O54785 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Limk2O54785 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Limk2O54785 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.23■□□□□ 0.67
Limk2O54785 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Limk2O54785 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Limk2O54785 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Limk2O54785 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Limk2O54785 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Limk2O54785 Gm38205-201ENSMUST00000192243 258 ntBASIC19.22■□□□□ 0.67
Limk2O54785 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.22■□□□□ 0.67
Limk2O54785 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Limk2O54785 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Limk2O54785 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Limk2O54785 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Limk2O54785 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Limk2O54785 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk2O54785 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk2O54785 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk2O54785 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk2O54785 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Limk2O54785 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk2O54785 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Limk2O54785 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Limk2O54785 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk2O54785 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Limk2O54785 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.21■□□□□ 0.67
Limk2O54785 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Limk2O54785 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk2O54785 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk2O54785 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.2■□□□□ 0.66
Limk2O54785 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Limk2O54785 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Limk2O54785 Reep4-203ENSMUST00000226563 1444 ntBASIC19.2■□□□□ 0.66
Limk2O54785 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Limk2O54785 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Limk2O54785 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Limk2O54785 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Limk2O54785 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.2■□□□□ 0.66
Limk2O54785 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Limk2O54785 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Limk2O54785 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Limk2O54785 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Limk2O54785 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Limk2O54785 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Limk2O54785 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Limk2O54785 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Limk2O54785 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Limk2O54785 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Limk2O54785 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.19■□□□□ 0.66
Limk2O54785 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Limk2O54785 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Limk2O54785 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Limk2O54785 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Limk2O54785 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms