Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SpibO35906 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SpibO35906 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.09■□□□□ 0.97
SpibO35906 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SpibO35906 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SpibO35906 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.08■□□□□ 0.97
SpibO35906 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SpibO35906 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.08■□□□□ 0.97
SpibO35906 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.08■□□□□ 0.97
SpibO35906 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SpibO35906 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SpibO35906 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SpibO35906 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SpibO35906 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SpibO35906 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SpibO35906 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SpibO35906 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SpibO35906 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SpibO35906 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SpibO35906 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.06■□□□□ 0.96
SpibO35906 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SpibO35906 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.06■□□□□ 0.96
SpibO35906 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SpibO35906 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
SpibO35906 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SpibO35906 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SpibO35906 Dio3-201ENSMUST00000097228 1449 ntBASIC21.05■□□□□ 0.96
SpibO35906 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
SpibO35906 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SpibO35906 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SpibO35906 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SpibO35906 Gm10812-201ENSMUST00000099864 546 ntBASIC21.05■□□□□ 0.96
SpibO35906 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SpibO35906 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.05■□□□□ 0.96
SpibO35906 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SpibO35906 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SpibO35906 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SpibO35906 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
SpibO35906 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SpibO35906 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SpibO35906 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SpibO35906 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SpibO35906 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SpibO35906 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SpibO35906 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.04■□□□□ 0.96
SpibO35906 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SpibO35906 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SpibO35906 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.04■□□□□ 0.96
SpibO35906 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SpibO35906 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SpibO35906 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SpibO35906 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SpibO35906 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.03■□□□□ 0.96
SpibO35906 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.03■□□□□ 0.96
SpibO35906 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.03■□□□□ 0.96
SpibO35906 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SpibO35906 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SpibO35906 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SpibO35906 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SpibO35906 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SpibO35906 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SpibO35906 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
SpibO35906 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SpibO35906 Gm5643-201ENSMUST00000117081 966 ntBASIC21.02■□□□□ 0.96
SpibO35906 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.02■□□□□ 0.96
SpibO35906 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SpibO35906 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.02■□□□□ 0.96
SpibO35906 Gm2559-201ENSMUST00000201323 363 ntBASIC21.02■□□□□ 0.96
SpibO35906 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SpibO35906 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SpibO35906 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SpibO35906 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SpibO35906 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.01■□□□□ 0.95
SpibO35906 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SpibO35906 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SpibO35906 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SpibO35906 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SpibO35906 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.01■□□□□ 0.95
SpibO35906 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.01■□□□□ 0.95
SpibO35906 Gm44549-201ENSMUST00000208351 577 ntBASIC21.01■□□□□ 0.95
SpibO35906 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SpibO35906 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SpibO35906 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.01■□□□□ 0.95
SpibO35906 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SpibO35906 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SpibO35906 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SpibO35906 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SpibO35906 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SpibO35906 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SpibO35906 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21■□□□□ 0.95
SpibO35906 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21■□□□□ 0.95
SpibO35906 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
SpibO35906 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21■□□□□ 0.95
SpibO35906 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SpibO35906 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SpibO35906 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SpibO35906 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SpibO35906 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SpibO35906 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SpibO35906 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 116.5 ms