Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Matn3O35701 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Matn3O35701 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Matn3O35701 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Matn3O35701 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Matn3O35701 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.21■□□□□ 0.35
Matn3O35701 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Matn3O35701 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
Matn3O35701 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Matn3O35701 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Matn3O35701 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Matn3O35701 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Matn3O35701 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Matn3O35701 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Matn3O35701 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Matn3O35701 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Matn3O35701 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.2■□□□□ 0.34
Matn3O35701 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Matn3O35701 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Matn3O35701 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.2■□□□□ 0.34
Matn3O35701 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.2■□□□□ 0.34
Matn3O35701 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Matn3O35701 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Matn3O35701 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Matn3O35701 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Matn3O35701 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Matn3O35701 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Matn3O35701 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Matn3O35701 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Matn3O35701 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Matn3O35701 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Matn3O35701 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Matn3O35701 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Matn3O35701 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Matn3O35701 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.19■□□□□ 0.34
Matn3O35701 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Matn3O35701 Fst-202ENSMUST00000223640 2612 ntBASIC17.19■□□□□ 0.34
Matn3O35701 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Matn3O35701 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Matn3O35701 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Matn3O35701 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Matn3O35701 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn3O35701 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
Matn3O35701 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn3O35701 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn3O35701 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Matn3O35701 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Matn3O35701 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Matn3O35701 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.18■□□□□ 0.34
Matn3O35701 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Matn3O35701 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn3O35701 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn3O35701 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Matn3O35701 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn3O35701 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn3O35701 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn3O35701 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Matn3O35701 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Matn3O35701 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn3O35701 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn3O35701 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn3O35701 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn3O35701 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn3O35701 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Matn3O35701 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn3O35701 Gm14117-201ENSMUST00000122417 843 ntBASIC17.17■□□□□ 0.34
Matn3O35701 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Matn3O35701 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Matn3O35701 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn3O35701 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Matn3O35701 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn3O35701 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Matn3O35701 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Matn3O35701 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn3O35701 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Matn3O35701 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Matn3O35701 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Matn3O35701 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn3O35701 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn3O35701 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn3O35701 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn3O35701 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Matn3O35701 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn3O35701 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Matn3O35701 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Matn3O35701 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn3O35701 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn3O35701 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Matn3O35701 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn3O35701 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn3O35701 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Matn3O35701 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Matn3O35701 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Matn3O35701 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn3O35701 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn3O35701 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Matn3O35701 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Matn3O35701 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Matn3O35701 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.15■□□□□ 0.34
Matn3O35701 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms