Protein–RNA interactions for Protein: O35280

Chek1, Serine/threonine-protein kinase Chk1, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chek1O35280 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chek1O35280 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chek1O35280 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chek1O35280 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chek1O35280 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chek1O35280 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chek1O35280 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.5■□□□□ 0.07
Chek1O35280 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.5■□□□□ 0.07
Chek1O35280 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chek1O35280 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chek1O35280 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chek1O35280 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.5■□□□□ 0.07
Chek1O35280 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chek1O35280 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chek1O35280 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Chek1O35280 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Chek1O35280 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chek1O35280 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chek1O35280 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chek1O35280 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chek1O35280 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chek1O35280 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chek1O35280 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
Chek1O35280 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.49■□□□□ 0.07
Chek1O35280 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.49■□□□□ 0.07
Chek1O35280 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.49■□□□□ 0.07
Chek1O35280 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chek1O35280 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chek1O35280 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chek1O35280 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Chek1O35280 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chek1O35280 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chek1O35280 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chek1O35280 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chek1O35280 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.48■□□□□ 0.07
Chek1O35280 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chek1O35280 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chek1O35280 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chek1O35280 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.48■□□□□ 0.07
Chek1O35280 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chek1O35280 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chek1O35280 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chek1O35280 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Chek1O35280 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.48■□□□□ 0.07
Chek1O35280 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chek1O35280 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chek1O35280 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chek1O35280 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chek1O35280 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chek1O35280 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Chek1O35280 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chek1O35280 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.47■□□□□ 0.07
Chek1O35280 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Chek1O35280 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Chek1O35280 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chek1O35280 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Chek1O35280 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chek1O35280 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chek1O35280 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.47■□□□□ 0.07
Chek1O35280 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chek1O35280 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chek1O35280 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chek1O35280 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chek1O35280 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chek1O35280 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.47■□□□□ 0.07
Chek1O35280 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chek1O35280 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Chek1O35280 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.46■□□□□ 0.07
Chek1O35280 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chek1O35280 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chek1O35280 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chek1O35280 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Chek1O35280 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chek1O35280 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Chek1O35280 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chek1O35280 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chek1O35280 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chek1O35280 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chek1O35280 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chek1O35280 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Chek1O35280 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chek1O35280 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chek1O35280 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chek1O35280 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chek1O35280 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Chek1O35280 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chek1O35280 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.45■□□□□ 0.06
Chek1O35280 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chek1O35280 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chek1O35280 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chek1O35280 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chek1O35280 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chek1O35280 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Chek1O35280 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chek1O35280 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chek1O35280 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Chek1O35280 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chek1O35280 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chek1O35280 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chek1O35280 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms