Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Tnfsf11O35235 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf11O35235 Gm10232-201ENSMUST00000089221 720 ntBASIC14.8□□□□□ -0.04
Tnfsf11O35235 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf11O35235 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf11O35235 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf11O35235 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf11O35235 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf11O35235 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf11O35235 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf11O35235 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf11O35235 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.79□□□□□ -0.04
Tnfsf11O35235 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.79□□□□□ -0.04
Tnfsf11O35235 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.79□□□□□ -0.04
Tnfsf11O35235 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.79□□□□□ -0.04
Tnfsf11O35235 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf11O35235 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Tnfsf11O35235 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf11O35235 AA386476-201ENSMUST00000098781 1665 ntBASIC14.79□□□□□ -0.04
Tnfsf11O35235 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf11O35235 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.78□□□□□ -0.04
Tnfsf11O35235 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Tnfsf11O35235 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.78□□□□□ -0.04
Tnfsf11O35235 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf11O35235 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf11O35235 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfsf11O35235 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfsf11O35235 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.77□□□□□ -0.04
Tnfsf11O35235 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Tnfsf11O35235 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Tnfsf11O35235 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Tnfsf11O35235 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.77□□□□□ -0.04
Tnfsf11O35235 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.77□□□□□ -0.04
Tnfsf11O35235 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfsf11O35235 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfsf11O35235 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfsf11O35235 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Tnfsf11O35235 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfsf11O35235 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfsf11O35235 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfsf11O35235 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfsf11O35235 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfsf11O35235 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfsf11O35235 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfsf11O35235 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfsf11O35235 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfsf11O35235 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms