Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Col15a1O35206 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC24.57■■□□□ 1.52
Col15a1O35206 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Col15a1O35206 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC24.57■■□□□ 1.52
Col15a1O35206 Arhgef33-211ENSMUST00000225658 473 ntBASIC24.57■■□□□ 1.52
Col15a1O35206 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Col15a1O35206 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Col15a1O35206 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
Col15a1O35206 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Col15a1O35206 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Col15a1O35206 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC24.55■■□□□ 1.52
Col15a1O35206 Gm19094-201ENSMUST00000209791 1246 ntBASIC24.55■■□□□ 1.52
Col15a1O35206 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col15a1O35206 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Col15a1O35206 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Col15a1O35206 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col15a1O35206 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col15a1O35206 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC24.54■■□□□ 1.52
Col15a1O35206 Gm29994-201ENSMUST00000195495 1193 ntBASIC24.54■■□□□ 1.52
Col15a1O35206 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC24.54■■□□□ 1.52
Col15a1O35206 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Col15a1O35206 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col15a1O35206 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col15a1O35206 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col15a1O35206 Nrn1-203ENSMUST00000223611 1443 ntBASIC24.54■■□□□ 1.52
Col15a1O35206 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Col15a1O35206 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col15a1O35206 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col15a1O35206 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col15a1O35206 AC154649.1-201ENSMUST00000227392 384 ntBASIC24.54■■□□□ 1.52
Col15a1O35206 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col15a1O35206 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Col15a1O35206 Gm10167-201ENSMUST00000150411 1479 ntBASIC24.54■■□□□ 1.52
Col15a1O35206 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col15a1O35206 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Col15a1O35206 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col15a1O35206 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col15a1O35206 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col15a1O35206 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Col15a1O35206 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col15a1O35206 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Col15a1O35206 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Col15a1O35206 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col15a1O35206 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Col15a1O35206 Gm18666-201ENSMUST00000190039 958 ntBASIC24.52■■□□□ 1.52
Col15a1O35206 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
Col15a1O35206 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Col15a1O35206 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Col15a1O35206 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Col15a1O35206 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col15a1O35206 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col15a1O35206 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC24.51■■□□□ 1.51
Col15a1O35206 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col15a1O35206 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Col15a1O35206 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC24.51■■□□□ 1.51
Col15a1O35206 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC24.51■■□□□ 1.51
Col15a1O35206 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC24.51■■□□□ 1.51
Col15a1O35206 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Col15a1O35206 Gm9484-201ENSMUST00000195892 1159 ntBASIC24.51■■□□□ 1.51
Col15a1O35206 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC24.51■■□□□ 1.51
Col15a1O35206 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC24.51■■□□□ 1.51
Col15a1O35206 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Col15a1O35206 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Col15a1O35206 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Col15a1O35206 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col15a1O35206 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col15a1O35206 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col15a1O35206 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col15a1O35206 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col15a1O35206 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col15a1O35206 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col15a1O35206 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC24.5■■□□□ 1.51
Col15a1O35206 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col15a1O35206 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col15a1O35206 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Col15a1O35206 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col15a1O35206 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col15a1O35206 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Col15a1O35206 Gm13836-201ENSMUST00000121159 501 ntBASIC24.49■■□□□ 1.51
Col15a1O35206 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Col15a1O35206 Krtap5-1-202ENSMUST00000188274 742 ntBASIC24.49■■□□□ 1.51
Col15a1O35206 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Col15a1O35206 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col15a1O35206 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Col15a1O35206 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col15a1O35206 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col15a1O35206 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col15a1O35206 Gm45640-201ENSMUST00000210665 1896 ntBASIC24.48■■□□□ 1.51
Col15a1O35206 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC24.48■■□□□ 1.51
Col15a1O35206 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Col15a1O35206 AC163280.1-201ENSMUST00000228194 1100 ntBASIC24.48■■□□□ 1.51
Col15a1O35206 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Col15a1O35206 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col15a1O35206 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Col15a1O35206 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col15a1O35206 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC24.47■■□□□ 1.51
Col15a1O35206 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col15a1O35206 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col15a1O35206 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC24.47■■□□□ 1.51
Col15a1O35206 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms