Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trove2O08848 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trove2O08848 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trove2O08848 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trove2O08848 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trove2O08848 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trove2O08848 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trove2O08848 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.39■□□□□ 0.69
Trove2O08848 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trove2O08848 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trove2O08848 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trove2O08848 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trove2O08848 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trove2O08848 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trove2O08848 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trove2O08848 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trove2O08848 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.38■□□□□ 0.69
Trove2O08848 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trove2O08848 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trove2O08848 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trove2O08848 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Trove2O08848 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trove2O08848 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trove2O08848 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trove2O08848 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trove2O08848 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Trove2O08848 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trove2O08848 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trove2O08848 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.37■□□□□ 0.69
Trove2O08848 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trove2O08848 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trove2O08848 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trove2O08848 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trove2O08848 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trove2O08848 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trove2O08848 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trove2O08848 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trove2O08848 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trove2O08848 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.36■□□□□ 0.69
Trove2O08848 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.36■□□□□ 0.69
Trove2O08848 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trove2O08848 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trove2O08848 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trove2O08848 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trove2O08848 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trove2O08848 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trove2O08848 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trove2O08848 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trove2O08848 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Trove2O08848 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Trove2O08848 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.35■□□□□ 0.69
Trove2O08848 Grk6-206ENSMUST00000224995 2971 ntBASIC19.35■□□□□ 0.69
Trove2O08848 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trove2O08848 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trove2O08848 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trove2O08848 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trove2O08848 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trove2O08848 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trove2O08848 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trove2O08848 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trove2O08848 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trove2O08848 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trove2O08848 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trove2O08848 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trove2O08848 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.34■□□□□ 0.69
Trove2O08848 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trove2O08848 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trove2O08848 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.34■□□□□ 0.69
Trove2O08848 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trove2O08848 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trove2O08848 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trove2O08848 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trove2O08848 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trove2O08848 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trove2O08848 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trove2O08848 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.33■□□□□ 0.69
Trove2O08848 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trove2O08848 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trove2O08848 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trove2O08848 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trove2O08848 Gm12922-201ENSMUST00000120626 809 ntBASIC19.33■□□□□ 0.68
Trove2O08848 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.33■□□□□ 0.68
Trove2O08848 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.33■□□□□ 0.68
Trove2O08848 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.33■□□□□ 0.68
Trove2O08848 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Trove2O08848 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trove2O08848 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trove2O08848 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trove2O08848 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trove2O08848 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trove2O08848 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trove2O08848 BC021767-201ENSMUST00000126387 1716 ntBASIC19.32■□□□□ 0.68
Trove2O08848 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trove2O08848 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trove2O08848 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.32■□□□□ 0.68
Trove2O08848 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trove2O08848 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.32■□□□□ 0.68
Trove2O08848 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trove2O08848 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trove2O08848 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms