Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ttc38A3KMP2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ttc38A3KMP2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ttc38A3KMP2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ttc38A3KMP2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ttc38A3KMP2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ttc38A3KMP2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ttc38A3KMP2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ttc38A3KMP2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ttc38A3KMP2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ttc38A3KMP2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ttc38A3KMP2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Ttc38A3KMP2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ttc38A3KMP2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ttc38A3KMP2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ttc38A3KMP2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ttc38A3KMP2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ttc38A3KMP2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ttc38A3KMP2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc38A3KMP2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc38A3KMP2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc38A3KMP2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc38A3KMP2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ttc38A3KMP2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc38A3KMP2 BC021767-201ENSMUST00000126387 1716 ntBASIC20.66■□□□□ 0.9
Ttc38A3KMP2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc38A3KMP2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc38A3KMP2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc38A3KMP2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc38A3KMP2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc38A3KMP2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ttc38A3KMP2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ttc38A3KMP2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ttc38A3KMP2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ttc38A3KMP2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ttc38A3KMP2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Ttc38A3KMP2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ttc38A3KMP2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc38A3KMP2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.63■□□□□ 0.89
Ttc38A3KMP2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc38A3KMP2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc38A3KMP2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc38A3KMP2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc38A3KMP2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc38A3KMP2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ttc38A3KMP2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.63■□□□□ 0.89
Ttc38A3KMP2 Gm38205-201ENSMUST00000192243 258 ntBASIC20.63■□□□□ 0.89
Ttc38A3KMP2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc38A3KMP2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Ttc38A3KMP2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc38A3KMP2 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.62■□□□□ 0.89
Ttc38A3KMP2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc38A3KMP2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc38A3KMP2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ttc38A3KMP2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ttc38A3KMP2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.62■□□□□ 0.89
Ttc38A3KMP2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc38A3KMP2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.62■□□□□ 0.89
Ttc38A3KMP2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc38A3KMP2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.62■□□□□ 0.89
Ttc38A3KMP2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ttc38A3KMP2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.61■□□□□ 0.89
Ttc38A3KMP2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc38A3KMP2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc38A3KMP2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc38A3KMP2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms