Protein–RNA interactions for Protein: A1L0T3

Ssc4d, Scavenger receptor cysteine-rich domain-containing group B protein, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssc4dA1L0T3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ssc4dA1L0T3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Ssc4dA1L0T3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssc4dA1L0T3 Gm12527-201ENSMUST00000117967 564 ntBASIC18.39■□□□□ 0.53
Ssc4dA1L0T3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.39■□□□□ 0.53
Ssc4dA1L0T3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssc4dA1L0T3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ssc4dA1L0T3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssc4dA1L0T3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssc4dA1L0T3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ssc4dA1L0T3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssc4dA1L0T3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ssc4dA1L0T3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssc4dA1L0T3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ssc4dA1L0T3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Ssc4dA1L0T3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ssc4dA1L0T3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssc4dA1L0T3 Golph3-202ENSMUST00000226517 2359 ntBASIC18.38■□□□□ 0.53
Ssc4dA1L0T3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.38■□□□□ 0.53
Ssc4dA1L0T3 Gm26524-201ENSMUST00000192339 390 ntBASIC18.38■□□□□ 0.53
Ssc4dA1L0T3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.38■□□□□ 0.53
Ssc4dA1L0T3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ssc4dA1L0T3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssc4dA1L0T3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssc4dA1L0T3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ssc4dA1L0T3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssc4dA1L0T3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ssc4dA1L0T3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssc4dA1L0T3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.37■□□□□ 0.53
Ssc4dA1L0T3 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.37■□□□□ 0.53
Ssc4dA1L0T3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssc4dA1L0T3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssc4dA1L0T3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssc4dA1L0T3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ssc4dA1L0T3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.37■□□□□ 0.53
Ssc4dA1L0T3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssc4dA1L0T3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssc4dA1L0T3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ssc4dA1L0T3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Ssc4dA1L0T3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssc4dA1L0T3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ssc4dA1L0T3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ssc4dA1L0T3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.36■□□□□ 0.53
Ssc4dA1L0T3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.36■□□□□ 0.53
Ssc4dA1L0T3 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.36■□□□□ 0.53
Ssc4dA1L0T3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.36■□□□□ 0.53
Ssc4dA1L0T3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ssc4dA1L0T3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssc4dA1L0T3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssc4dA1L0T3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssc4dA1L0T3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssc4dA1L0T3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssc4dA1L0T3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssc4dA1L0T3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssc4dA1L0T3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssc4dA1L0T3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.35■□□□□ 0.53
Ssc4dA1L0T3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssc4dA1L0T3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.35■□□□□ 0.53
Ssc4dA1L0T3 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.35■□□□□ 0.53
Ssc4dA1L0T3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssc4dA1L0T3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ssc4dA1L0T3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssc4dA1L0T3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssc4dA1L0T3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ssc4dA1L0T3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssc4dA1L0T3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssc4dA1L0T3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ssc4dA1L0T3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssc4dA1L0T3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssc4dA1L0T3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssc4dA1L0T3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssc4dA1L0T3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssc4dA1L0T3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ssc4dA1L0T3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssc4dA1L0T3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssc4dA1L0T3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ssc4dA1L0T3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssc4dA1L0T3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssc4dA1L0T3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.32■□□□□ 0.52
Ssc4dA1L0T3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssc4dA1L0T3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssc4dA1L0T3 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.32■□□□□ 0.52
Ssc4dA1L0T3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ssc4dA1L0T3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssc4dA1L0T3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms