Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv6-25A0A140T8N7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.81■□□□□ 0.44
Igkv6-25A0A140T8N7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv6-25A0A140T8N7 Gm22240-201ENSMUST00000175225 82 ntBASIC17.81■□□□□ 0.44
Igkv6-25A0A140T8N7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.81■□□□□ 0.44
Igkv6-25A0A140T8N7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv6-25A0A140T8N7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Igkv6-25A0A140T8N7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv6-25A0A140T8N7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv6-25A0A140T8N7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv6-25A0A140T8N7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv6-25A0A140T8N7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv6-25A0A140T8N7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Igkv6-25A0A140T8N7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv6-25A0A140T8N7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv6-25A0A140T8N7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.79■□□□□ 0.44
Igkv6-25A0A140T8N7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.79■□□□□ 0.44
Igkv6-25A0A140T8N7 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.79■□□□□ 0.44
Igkv6-25A0A140T8N7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv6-25A0A140T8N7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv6-25A0A140T8N7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Igkv6-25A0A140T8N7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Igkv6-25A0A140T8N7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv6-25A0A140T8N7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv6-25A0A140T8N7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv6-25A0A140T8N7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Igkv6-25A0A140T8N7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv6-25A0A140T8N7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Igkv6-25A0A140T8N7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv6-25A0A140T8N7 Trmt13-210ENSMUST00000198454 880 ntBASIC17.77■□□□□ 0.44
Igkv6-25A0A140T8N7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv6-25A0A140T8N7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv6-25A0A140T8N7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Igkv6-25A0A140T8N7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Igkv6-25A0A140T8N7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Igkv6-25A0A140T8N7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Igkv6-25A0A140T8N7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Gm13168-201ENSMUST00000121771 632 ntBASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv6-25A0A140T8N7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.75■□□□□ 0.43
Igkv6-25A0A140T8N7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms