Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv29A0A0G2LB96 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv29A0A0G2LB96 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv29A0A0G2LB96 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv29A0A0G2LB96 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv29A0A0G2LB96 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv29A0A0G2LB96 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv29A0A0G2LB96 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv29A0A0G2LB96 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trbv29A0A0G2LB96 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv29A0A0G2LB96 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv29A0A0G2LB96 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Trbv29A0A0G2LB96 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trbv29A0A0G2LB96 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv29A0A0G2LB96 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trbv29A0A0G2LB96 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv29A0A0G2LB96 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Trbv29A0A0G2LB96 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv29A0A0G2LB96 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv29A0A0G2LB96 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv29A0A0G2LB96 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv29A0A0G2LB96 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.71■□□□□ 0.1
Trbv29A0A0G2LB96 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv29A0A0G2LB96 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Trbv29A0A0G2LB96 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Trbv29A0A0G2LB96 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Trbv29A0A0G2LB96 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Gm12922-201ENSMUST00000120626 809 ntBASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Gm14117-201ENSMUST00000122417 843 ntBASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Rps24-207ENSMUST00000224568 714 ntBASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv29A0A0G2LB96 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv29A0A0G2LB96 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv29A0A0G2LB96 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv29A0A0G2LB96 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv29A0A0G2LB96 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.69■□□□□ 0.1
Trbv29A0A0G2LB96 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv29A0A0G2LB96 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv29A0A0G2LB96 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trbv29A0A0G2LB96 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv29A0A0G2LB96 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trbv29A0A0G2LB96 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv29A0A0G2LB96 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv29A0A0G2LB96 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.68■□□□□ 0.1
Trbv29A0A0G2LB96 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv29A0A0G2LB96 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv29A0A0G2LB96 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv29A0A0G2LB96 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv29A0A0G2LB96 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv29A0A0G2LB96 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv29A0A0G2LB96 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv29A0A0G2LB96 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trbv29A0A0G2LB96 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv29A0A0G2LB96 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv29A0A0G2LB96 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Trbv29A0A0G2LB96 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv29A0A0G2LB96 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv29A0A0G2LB96 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv29A0A0G2LB96 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv29A0A0G2LB96 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv29A0A0G2LB96 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms