Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Gm43592-201ENSMUST00000196922 1165 ntBASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv8-28A0A0G2JE47 Dmtn-210ENSMUST00000228824 2377 ntBASIC11.9□□□□□ -0.51
Igkv8-28A0A0G2JE47 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Igkv8-28A0A0G2JE47 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Igkv8-28A0A0G2JE47 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Igkv8-28A0A0G2JE47 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Igkv8-28A0A0G2JE47 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Igkv8-28A0A0G2JE47 Gm9954-202ENSMUST00000198686 4725 ntBASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv8-28A0A0G2JE47 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Gm28536-201ENSMUST00000190971 1317 ntBASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Gm20100-201ENSMUST00000209418 2272 ntBASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv8-28A0A0G2JE47 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Igkv8-28A0A0G2JE47 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv8-28A0A0G2JE47 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv8-28A0A0G2JE47 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv8-28A0A0G2JE47 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv8-28A0A0G2JE47 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Igkv8-28A0A0G2JE47 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv8-28A0A0G2JE47 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms