Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Igkv5-43A0A0B4J1J2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.47■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.47■□□□□ 0.71
Igkv5-43A0A0B4J1J2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.46■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.46■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.45■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Igkv5-43A0A0B4J1J2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.45■□□□□ 0.7
Igkv5-43A0A0B4J1J2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.45■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv5-43A0A0B4J1J2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gm4968-201ENSMUST00000071458 858 ntBASIC19.43■□□□□ 0.7
Igkv5-43A0A0B4J1J2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-43A0A0B4J1J2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-43A0A0B4J1J2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.42■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.41■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.41■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.41■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.41■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.41■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.4■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms