Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.02■□□□□ 0.32
Trbv20A0A0B4J1H5 Gm9870-201ENSMUST00000063874 645 ntBASIC17.02■□□□□ 0.32
Trbv20A0A0B4J1H5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trbv20A0A0B4J1H5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trbv20A0A0B4J1H5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.02■□□□□ 0.31
Trbv20A0A0B4J1H5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv20A0A0B4J1H5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv20A0A0B4J1H5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv20A0A0B4J1H5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv20A0A0B4J1H5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trbv20A0A0B4J1H5 Gm10232-201ENSMUST00000089221 720 ntBASIC17.01■□□□□ 0.31
Trbv20A0A0B4J1H5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv20A0A0B4J1H5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
Trbv20A0A0B4J1H5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv20A0A0B4J1H5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv20A0A0B4J1H5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv20A0A0B4J1H5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv20A0A0B4J1H5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv20A0A0B4J1H5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv20A0A0B4J1H5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trbv20A0A0B4J1H5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trbv20A0A0B4J1H5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv20A0A0B4J1H5 Gm40881-201ENSMUST00000223397 166 ntBASIC17■□□□□ 0.31
Trbv20A0A0B4J1H5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv20A0A0B4J1H5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv20A0A0B4J1H5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv20A0A0B4J1H5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv20A0A0B4J1H5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trbv20A0A0B4J1H5 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trbv20A0A0B4J1H5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Mir6538-201ENSMUST00000183713 110 ntBASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.98■□□□□ 0.31
Trbv20A0A0B4J1H5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv20A0A0B4J1H5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv20A0A0B4J1H5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv20A0A0B4J1H5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv20A0A0B4J1H5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.96■□□□□ 0.31
Trbv20A0A0B4J1H5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trbv20A0A0B4J1H5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv20A0A0B4J1H5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.96■□□□□ 0.31
Trbv20A0A0B4J1H5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv20A0A0B4J1H5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv20A0A0B4J1H5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trbv20A0A0B4J1H5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv20A0A0B4J1H5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv20A0A0B4J1H5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv20A0A0B4J1H5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv20A0A0B4J1H5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv20A0A0B4J1H5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv20A0A0B4J1H5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms