Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.28■□□□□ 0.04
Trbv5A0A0B4J1G9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv5A0A0B4J1G9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv5A0A0B4J1G9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv5A0A0B4J1G9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv5A0A0B4J1G9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv5A0A0B4J1G9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv5A0A0B4J1G9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv5A0A0B4J1G9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv5A0A0B4J1G9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv5A0A0B4J1G9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv5A0A0B4J1G9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv5A0A0B4J1G9 AA386476-201ENSMUST00000098781 1665 ntBASIC15.27■□□□□ 0.03
Trbv5A0A0B4J1G9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv5A0A0B4J1G9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv5A0A0B4J1G9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv5A0A0B4J1G9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trbv5A0A0B4J1G9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv5A0A0B4J1G9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv5A0A0B4J1G9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv5A0A0B4J1G9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv5A0A0B4J1G9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trbv5A0A0B4J1G9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv5A0A0B4J1G9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv5A0A0B4J1G9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Gm12366-201ENSMUST00000121722 873 ntBASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Gm5786-201ENSMUST00000085368 882 ntBASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.26■□□□□ 0.03
Trbv5A0A0B4J1G9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv5A0A0B4J1G9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv5A0A0B4J1G9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv5A0A0B4J1G9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv5A0A0B4J1G9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv5A0A0B4J1G9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv5A0A0B4J1G9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv5A0A0B4J1G9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trbv5A0A0B4J1G9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv5A0A0B4J1G9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Trbv5A0A0B4J1G9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv5A0A0B4J1G9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv5A0A0B4J1G9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv5A0A0B4J1G9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv5A0A0B4J1G9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv5A0A0B4J1G9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv5A0A0B4J1G9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv5A0A0B4J1G9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv5A0A0B4J1G9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv5A0A0B4J1G9 Gm10399-202ENSMUST00000202768 748 ntBASIC15.24■□□□□ 0.03
Trbv5A0A0B4J1G9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv5A0A0B4J1G9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv5A0A0B4J1G9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv5A0A0B4J1G9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trbv5A0A0B4J1G9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv5A0A0B4J1G9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv5A0A0B4J1G9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv5A0A0B4J1G9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv5A0A0B4J1G9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms