Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-5A0A075B6B9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-5A0A075B6B9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-5A0A075B6B9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav6d-5A0A075B6B9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav6d-5A0A075B6B9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-5A0A075B6B9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-5A0A075B6B9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.34■□□□□ 0.05
Trav6d-5A0A075B6B9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6d-5A0A075B6B9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-5A0A075B6B9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-5A0A075B6B9 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.33■□□□□ 0.04
Trav6d-5A0A075B6B9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-5A0A075B6B9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-5A0A075B6B9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trav6d-5A0A075B6B9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.33■□□□□ 0.04
Trav6d-5A0A075B6B9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-5A0A075B6B9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav6d-5A0A075B6B9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trav6d-5A0A075B6B9 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.33■□□□□ 0.04
Trav6d-5A0A075B6B9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-5A0A075B6B9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-5A0A075B6B9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-5A0A075B6B9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-5A0A075B6B9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-5A0A075B6B9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav6d-5A0A075B6B9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-5A0A075B6B9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav6d-5A0A075B6B9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-5A0A075B6B9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-5A0A075B6B9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-5A0A075B6B9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-5A0A075B6B9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-5A0A075B6B9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-5A0A075B6B9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-5A0A075B6B9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-5A0A075B6B9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-5A0A075B6B9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-5A0A075B6B9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav6d-5A0A075B6B9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-5A0A075B6B9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-5A0A075B6B9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-5A0A075B6B9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-5A0A075B6B9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-5A0A075B6B9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-5A0A075B6B9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 Serp2-204ENSMUST00000228055 705 ntBASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-5A0A075B6B9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-5A0A075B6B9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trav6d-5A0A075B6B9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trav6d-5A0A075B6B9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-5A0A075B6B9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-5A0A075B6B9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-5A0A075B6B9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-5A0A075B6B9 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms