Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Gm43137-201ENSMUST00000198052 594 ntBASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav9d-1A0A075B699 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9d-1A0A075B699 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9d-1A0A075B699 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9d-1A0A075B699 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-1A0A075B699 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-1A0A075B699 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
Trav9d-1A0A075B699 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-1A0A075B699 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-1A0A075B699 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav9d-1A0A075B699 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-1A0A075B699 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-1A0A075B699 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav9d-1A0A075B699 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.56□□□□□ -0.08
Trav9d-1A0A075B699 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms